Table of contents

Report

Group: sgd - Dataset: sgd

SUMMARY

This report generated on 2024-04-25

Header From Original Association File

!gaf-version: 2.2
!date-generated: 20240422
!generated-by: Saccharomyces Genome Database (SGD)
!URL: https://www.yeastgenome.org/
!Contact Email: sgd-helpdesk@lists.stanford.edu
!Funding: NHGRI at US NIH, grant number U41-HG001315
!

Contents

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other

MESSAGES

gorule-0000001

GAF lines are parsed according to GAF 2.2 specifications

Messages

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

Messages

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

gorule-0000013

Taxon-appropriate annotation check

Messages

gorule-0000015

Dual species taxon check

gorule-0000016

With/From: IC annotations require a With/From GO ID

gorule-0000017

IDA annotations must not have a With/From entry

Messages

gorule-0000018

IPI annotations require a With/From entry

Messages

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

gorule-0000029

IEAs should be less than one year old.

gorule-0000030

Obsolete GO_REFs are not allowed

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

gorule-0000043

Check for valid combination of evidence code and GO_REF

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

Messages

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

gorule-0000055

References should have only one ID per ID space

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

gorule-0000061

Allowed gene product to term relations (gp2term)

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

Messages

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

other

Predictions

GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity ISS
GO:0006633 fatty acid biosynthetic process AnnotationPropagation P GO:0000036 acyl carrier activity IBA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0003678 DNA helicase activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0038024 cargo receptor activity IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:1990627 mitochondrial inner membrane fusion IMP
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IMP
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:1901679 nucleotide transmembrane transport AnnotationPropagation P GO:0005347 ATP transmembrane transporter activity IBA
GO:0015867 ATP transport AnnotationPropagation P GO:0005347 ATP transmembrane transporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IMP
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0015837 amine transport AnnotationPropagation P GO:0005275 amine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005275 amine transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0006657 CDP-choline pathway AnnotationPropagation P GO:0004103 choline kinase activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0009107 lipoate biosynthetic process AnnotationPropagation P GO:0016992 lipoate synthase activity IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:0006868 glutamine transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IBA
GO:0015695 organic cation transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015186 L-glutamine transmembrane transporter activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007036 vacuolar calcium ion homeostasis IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0022841 potassium ion leak channel activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0045145 single-stranded DNA 5'-3' DNA exonuclease activity IBA
GO:0098656 monoatomic anion transmembrane transport AnnotationPropagation P GO:0008308 voltage-gated monoatomic anion channel activity IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IMP
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006390 mitochondrial transcription IDA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015793 glycerol transmembrane transport AnnotationPropagation P GO:0015254 glycerol channel activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015662 P-type ion transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015662 P-type ion transporter activity IMP
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0070778 L-aspartate transmembrane transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0015800 acidic amino acid transport AnnotationPropagation P GO:0015183 L-aspartate transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0097359 UDP-glucosylation AnnotationPropagation P GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IDA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0015741 fumarate transport AnnotationPropagation P GO:0005469 succinate:fumarate antiporter activity IBA
GO:0071422 succinate transmembrane transport AnnotationPropagation P GO:0005469 succinate:fumarate antiporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016433 rRNA (adenine) methyltransferase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IDA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0089709 L-histidine transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:1902356 oxaloacetate(2-) transmembrane transport AnnotationPropagation P GO:0015131 oxaloacetate transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0005783 endoplasmic reticulum AnnotationPropagation C GO:0006621 protein retention in ER lumen IBA
GO:0006591 ornithine metabolic process AnnotationPropagation P GO:0004585 ornithine carbamoyltransferase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IDA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process AnnotationPropagation P GO:0016303 1-phosphatidylinositol-3-kinase activity IDA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002196 Ser-tRNA(Ala) hydrolase activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:1901962 S-adenosyl-L-methionine transmembrane transport AnnotationPropagation P GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IDA
GO:0009972 cytidine deamination AnnotationPropagation P GO:0004126 cytidine deaminase activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium transmembrane transporter activity IBA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0090615 mitochondrial mRNA processing IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IDA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0015385 sodium:proton antiporter activity IBA
GO:0051168 nuclear export AnnotationPropagation P GO:0005049 nuclear export signal receptor activity IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0090615 mitochondrial mRNA processing IMP
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010484 histone H3 acetyltransferase activity IDA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005388 P-type calcium transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IDA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0007007 inner mitochondrial membrane organization IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0005829 cytosol AnnotationPropagation C GO:0002184 cytoplasmic translational termination IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0072354 histone H3T3 kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process AnnotationPropagation P GO:0004326 tetrahydrofolylpolyglutamate synthase activity IBA
GO:1990570 GDP-mannose transmembrane transport AnnotationPropagation P GO:0005458 GDP-mannose transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0033260 nuclear DNA replication IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006222 UMP biosynthetic process AnnotationPropagation P GO:0004849 uridine kinase activity IBA
GO:0051168 nuclear export AnnotationPropagation P GO:0005049 nuclear export signal receptor activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015768 maltose transport AnnotationPropagation P GO:0005363 maltose transmembrane transporter activity IGI
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005363 maltose transmembrane transporter activity IGI
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0089722 phosphoenolpyruvate transmembrane transport AnnotationPropagation P GO:0089721 phosphoenolpyruvate transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IDA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IDA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IDA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140069 histone butyryltransferase activity IDA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0032452 histone demethylase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0030970 retrograde protein transport, ER to cytosol IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0046901 tetrahydrofolylpolyglutamate biosynthetic process AnnotationPropagation P GO:0004326 tetrahydrofolylpolyglutamate synthase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070126 mitochondrial translational termination IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0035725 sodium ion transmembrane transport AnnotationPropagation P GO:0005436 sodium:phosphate symporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016435 rRNA (guanine) methyltransferase activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:1990180 mitochondrial tRNA 3'-end processing IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IDA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IMP
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IDA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0033214 siderophore-dependent iron import into cell AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0044718 siderophore transmembrane transport AnnotationPropagation P GO:0015343 siderophore-iron transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0036261 7-methylguanosine cap hypermethylation AnnotationPropagation P GO:0071164 RNA cap trimethylguanosine synthase activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070150 mitochondrial glycyl-tRNA aminoacylation IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 NAD-dependent histone deacetylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0032542 sulfiredoxin activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IDA
GO:0001676 long-chain fatty acid metabolic process AnnotationPropagation P GO:0004467 long-chain fatty acid-CoA ligase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0001188 RNA polymerase I preinitiation complex assembly AnnotationPropagation P GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071038 TRAMP-dependent tRNA surveillance pathway IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010484 histone H3 acetyltransferase activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0015174 basic amino acid transmembrane transporter activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0090150 establishment of protein localization to membrane AnnotationPropagation P GO:0032977 membrane insertase activity IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process AnnotationPropagation P GO:0042281 dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015909 long-chain fatty acid transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0005324 long-chain fatty acid transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 NAD-dependent histone deacetylase activity IDA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010484 histone H3 acetyltransferase activity IDA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008865 fructokinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0000023 maltose metabolic process AnnotationPropagation P GO:0032450 maltose alpha-glucosidase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0000014 single-stranded DNA endodeoxyribonuclease activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:1902476 chloride transmembrane transport AnnotationPropagation P GO:0005254 chloride channel activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:0098734 macromolecule depalmitoylation AnnotationPropagation P GO:0008474 palmitoyl-(protein) hydrolase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0008469 histone arginine N-methyltransferase activity IBA
GO:0006412 translation AnnotationPropagation P GO:0030533 triplet codon-amino acid adaptor activity ISM
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IDA
GO:0000023 maltose metabolic process AnnotationPropagation P GO:0032450 maltose alpha-glucosidase activity ISS
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0010420 3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IDA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0035349 coenzyme A transmembrane transport AnnotationPropagation P GO:0015228 coenzyme A transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:1990570 GDP-mannose transmembrane transport AnnotationPropagation P GO:0005458 GDP-mannose transmembrane transporter activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 adenylate kinase activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071039 nuclear polyadenylation-dependent CUT catabolic process IBA
GO:1901475 pyruvate transmembrane transport AnnotationPropagation P GO:0050833 pyruvate transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IDA
GO:1903790 guanine nucleotide transmembrane transport AnnotationPropagation P GO:0001409 guanine nucleotide transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IDA
GO:0061615 glycolytic process through fructose-6-phosphate AnnotationPropagation P GO:0003872 6-phosphofructokinase activity IDA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043138 3'-5' DNA helicase activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0042800 histone H3K4 methyltransferase activity IDA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071038 TRAMP-dependent tRNA surveillance pathway IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003747 translation release factor activity IMP
GO:0006415 translational termination AnnotationPropagation P GO:0003747 translation release factor activity IMP
GO:0006417 regulation of translation AnnotationPropagation P GO:0003747 translation release factor activity IMP
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071038 TRAMP-dependent tRNA surveillance pathway IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IDA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070158 mitochondrial seryl-tRNA aminoacylation IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IDA
GO:1903711 spermidine transmembrane transport AnnotationPropagation P GO:0015606 spermidine transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IDA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0090615 mitochondrial mRNA processing IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IDA
GO:0034755 iron ion transmembrane transport AnnotationPropagation P GO:0015093 ferrous iron transmembrane transporter activity IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:1903424 fluoride transmembrane transport AnnotationPropagation P GO:1903425 fluoride transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0070574 cadmium ion transmembrane transport AnnotationPropagation P GO:0015086 cadmium ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IDA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0071266 'de novo' L-methionine biosynthetic process AnnotationPropagation P GO:0003961 O-acetylhomoserine aminocarboxypropyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0043998 histone H2A acetyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IDA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000964 mitochondrial RNA 5'-end processing IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IDA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006269 DNA replication, synthesis of primer AnnotationPropagation P GO:0003896 DNA primase activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0006302 double-strand break repair FoldBasedPredictor GO:0071921 cohesin loading part_of GO:0006302 double-strand break repair IDA
GO:0007532 regulation of mating-type specific transcription, DNA-templated FoldBasedPredictor GO:0003714 transcription corepressor activity part_of GO:0007532 regulation of mating-type specific transcription, DNA-templated IDA
GO:0000421 autophagosome membrane FoldBasedPredictor GO:1904053 positive regulation of protein targeting to vacuole involved in autophagy has_input SGD:S000001679 occurs_in GO:0000421 autophagosome membrane IMP
GO:0043335 protein unfolding FoldBasedPredictor GO:0140318 protein transporter activity directly_positively_regulates GO:0005052 peroxisome matrix targeting signal-1 binding has_input SGD:S000002652 part_of GO:0016562 protein import into peroxisome matrix, receptor recycling part_of GO:0043335 protein unfolding IDA
GO:0016562 protein import into peroxisome matrix, receptor recycling FoldBasedPredictor GO:0140318 protein transporter activity directly_positively_regulates GO:0005052 peroxisome matrix targeting signal-1 binding has_input SGD:S000002652 part_of GO:0016562 protein import into peroxisome matrix, receptor recycling part_of GO:0043335 protein unfolding IDA
GO:0005634 nucleus FoldBasedPredictor GO:0003700 DNA-binding transcription factor activity occurs_in GO:0005634 nucleus part_of GO:0006355 regulation of DNA-templated transcription ISS
GO:0005938 cell cortex FoldBasedPredictor GO:0030010 establishment of cell polarity occurs_in GO:0005938 cell cortex occurs_in GO:0043332 mating projection tip part_of GO:0000753 cell morphogenesis involved in conjugation with cellular fusion IMP
GO:0000753 cell morphogenesis involved in conjugation with cellular fusion FoldBasedPredictor GO:0030010 establishment of cell polarity occurs_in GO:0005938 cell cortex occurs_in GO:0043332 mating projection tip part_of GO:0000753 cell morphogenesis involved in conjugation with cellular fusion IMP
GO:0043332 mating projection tip FoldBasedPredictor GO:0030010 establishment of cell polarity occurs_in GO:0005938 cell cortex occurs_in GO:0043332 mating projection tip part_of GO:0000753 cell morphogenesis involved in conjugation with cellular fusion IMP
GO:0006995 cellular response to nitrogen starvation FoldBasedPredictor GO:1901524 regulation of mitophagy occurs_in GO:0005739 mitochondrion part_of GO:0006995 cellular response to nitrogen starvation IMP
GO:0005739 mitochondrion FoldBasedPredictor GO:1901524 regulation of mitophagy occurs_in GO:0005739 mitochondrion part_of GO:0006995 cellular response to nitrogen starvation IMP
GO:0035725 sodium ion transmembrane transport FoldBasedPredictor GO:0015662 P-type ion transporter activity part_of GO:0035725 sodium ion transmembrane transport IMP
GO:0000025 maltose catabolic process FoldBasedPredictor GO:0032450 maltose alpha-glucosidase activity part_of GO:0000025 maltose catabolic process ISS
GO:1904981 maltose transmembrane transport FoldBasedPredictor GO:0005363 maltose transmembrane transporter activity part_of GO:1904981 maltose transmembrane transport IGI
GO:1901525 negative regulation of mitophagy FoldBasedPredictor GO:0004722 protein serine/threonine phosphatase activity occurs_in GO:0005741 mitochondrial outer membrane part_of GO:0070262 peptidyl-serine dephosphorylation part_of GO:1901525 negative regulation of mitophagy IDA
GO:0070262 peptidyl-serine dephosphorylation FoldBasedPredictor GO:0004722 protein serine/threonine phosphatase activity occurs_in GO:0005741 mitochondrial outer membrane part_of GO:0070262 peptidyl-serine dephosphorylation part_of GO:1901525 negative regulation of mitophagy IDA
GO:0005741 mitochondrial outer membrane FoldBasedPredictor GO:0004722 protein serine/threonine phosphatase activity occurs_in GO:0005741 mitochondrial outer membrane part_of GO:0070262 peptidyl-serine dephosphorylation part_of GO:1901525 negative regulation of mitophagy IDA
GO:0140067 peptidyl-lysine butyrylation FoldBasedPredictor GO:0140069 histone butyryltransferase activity part_of GO:0140067 peptidyl-lysine butyrylation IDA
GO:0031509 subtelomeric heterochromatin formation FoldBasedPredictor GO:0003682 chromatin binding part_of GO:0031509 subtelomeric heterochromatin formation IDA
GO:0051304 chromosome separation FoldBasedPredictor GO:0003677 DNA binding part_of GO:0051304 chromosome separation IDA

Predictions (experimental)