GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0052735	tRNA (cytosine-3-)-methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070183	mitochondrial tryptophanyl-tRNA aminoacylation	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0016423	tRNA (guanine) methyltransferase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:0010998	regulation of translational initiation by eIF2 alpha phosphorylation	AnnotationPropagation	P	GO:0004694	eukaryotic translation initiation factor 2alpha kinase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:1903830	magnesium ion transmembrane transport	AnnotationPropagation	P	GO:0015095	magnesium ion transmembrane transporter activity	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0008379	thioredoxin peroxidase activity	IBA
GO:0071577	zinc ion transmembrane transport	AnnotationPropagation	P	GO:0000007	low-affinity zinc ion transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IBA
GO:0015909	long-chain fatty acid transport	AnnotationPropagation	P	GO:0005324	long-chain fatty acid transporter activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0006627	protein processing involved in protein targeting to mitochondrion	IBA
GO:1903424	fluoride transmembrane transport	AnnotationPropagation	P	GO:1903425	fluoride transmembrane transporter activity	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0051457	maintenance of protein location in nucleus	IMP
GO:0035349	coenzyme A transmembrane transport	AnnotationPropagation	P	GO:0015228	coenzyme A transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	RNA endonuclease activity	IDA
GO:1903710	spermine transmembrane transport	AnnotationPropagation	P	GO:0000297	spermine transmembrane transporter activity	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0005227	calcium activated cation channel activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:1902476	chloride transmembrane transport	AnnotationPropagation	P	GO:0005254	chloride channel activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	ISS
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	ISS
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0017136	NAD-dependent histone deacetylase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0090615	mitochondrial mRNA processing	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0015825	L-serine transport	AnnotationPropagation	P	GO:0015194	L-serine transmembrane transporter activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015194	L-serine transmembrane transporter activity	IBA
GO:0051170	import into nucleus	AnnotationPropagation	P	GO:0061608	nuclear import signal receptor activity	IBA
GO:0000781	chromosome, telomeric region	AnnotationPropagation	C	GO:0031509	subtelomeric heterochromatin formation	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0030696	tRNA (m5U54) methyltransferase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IDA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0043138	3'-5' DNA helicase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein insertion into mitochondrial outer membrane	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0042626	ATPase-coupled transmembrane transporter activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0043139	5'-3' DNA helicase activity	IBA
GO:0015768	maltose transport	AnnotationPropagation	P	GO:0005363	maltose transmembrane transporter activity	IGI
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005363	maltose transmembrane transporter activity	IGI
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IBA
GO:0035269	protein O-linked mannosylation	AnnotationPropagation	P	GO:0004169	dolichyl-phosphate-mannose-protein mannosyltransferase activity	IDA
GO:1903790	guanine nucleotide transmembrane transport	AnnotationPropagation	P	GO:0001409	guanine nucleotide transmembrane transporter activity	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0000213	tRNA-intron endonuclease activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0007007	inner mitochondrial membrane organization	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0000964	mitochondrial RNA 5'-end processing	IBA
GO:0046940	nucleoside monophosphate phosphorylation	AnnotationPropagation	P	GO:0004017	adenylate kinase activity	IBA
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0140107	high-affinity potassium ion transmembrane transporter activity	IBA
GO:0035352	NAD transmembrane transport	AnnotationPropagation	P	GO:0051724	NAD transmembrane transporter activity	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	RNA endonuclease activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IDA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:1990627	mitochondrial inner membrane fusion	IMP
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004520	DNA endonuclease activity	IDA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0005371	tricarboxylate secondary active transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0042626	ATPase-coupled transmembrane transporter activity	IBA
GO:0042823	pyridoxal phosphate biosynthetic process	AnnotationPropagation	P	GO:0004733	pyridoxamine-phosphate oxidase activity	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0015918	sterol transport	AnnotationPropagation	P	GO:0015248	sterol transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140068	histone crotonyltransferase activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0089722	phosphoenolpyruvate transmembrane transport	AnnotationPropagation	P	GO:0089721	phosphoenolpyruvate transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0015851	nucleobase transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:1902358	sulfate transmembrane transport	AnnotationPropagation	P	GO:0015116	sulfate transmembrane transporter activity	IBA
GO:0007186	G protein-coupled receptor signaling pathway	AnnotationPropagation	P	GO:0004932	mating-type factor pheromone receptor activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IDA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0006269	DNA replication, synthesis of RNA primer	AnnotationPropagation	P	GO:0003896	DNA primase activity	IBA
GO:0035445	borate transmembrane transport	AnnotationPropagation	P	GO:0080139	borate efflux transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0016433	rRNA (adenine) methyltransferase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015179	L-amino acid transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0006895	Golgi to endosome transport	IBA
GO:1990569	UDP-N-acetylglucosamine transmembrane transport	AnnotationPropagation	P	GO:0005462	UDP-N-acetylglucosamine transmembrane transporter activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0035461	vitamin transmembrane transport	AnnotationPropagation	P	GO:0008517	folic acid transmembrane transporter activity	IBA
GO:0015884	folic acid transport	AnnotationPropagation	P	GO:0008517	folic acid transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0008517	folic acid transmembrane transporter activity	IBA
GO:0006833	water transport	AnnotationPropagation	P	GO:0015250	water channel activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015250	water channel activity	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0015421	ABC-type oligopeptide transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0015887	pantothenate transmembrane transport	AnnotationPropagation	P	GO:0015233	pantothenate transmembrane transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0015746	citrate transport	AnnotationPropagation	P	GO:0071913	citrate secondary active transmembrane transporter activity	IBA
GO:0035674	tricarboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0071913	citrate secondary active transmembrane transporter activity	IBA
GO:0061727	methylglyoxal catabolic process to lactate	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0019249	lactate biosynthetic process	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0043138	3'-5' DNA helicase activity	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0015851	nucleobase transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0017136	NAD-dependent histone deacetylase activity	IDA
GO:0006633	fatty acid biosynthetic process	AnnotationPropagation	P	GO:0000036	acyl carrier activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0005227	calcium activated cation channel activity	IBA
GO:0006657	CDP-choline pathway	AnnotationPropagation	P	GO:0004103	choline kinase activity	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0019430	removal of superoxide radicals	AnnotationPropagation	P	GO:0004784	superoxide dismutase activity	IDA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0004407	histone deacetylase activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0002196	Ser-tRNA(Ala) hydrolase activity	IBA
GO:0031167	rRNA methylation	AnnotationPropagation	P	GO:0016435	rRNA (guanine) methyltransferase activity	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0070588	calcium ion transmembrane transport	AnnotationPropagation	P	GO:0015369	calcium:proton antiporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015369	calcium:proton antiporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0035434	copper ion transmembrane transport	AnnotationPropagation	P	GO:0005375	copper ion transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein insertion into mitochondrial outer membrane	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0008419	RNA lariat debranching enzyme activity	IBA
GO:0046901	tetrahydrofolylpolyglutamate biosynthetic process	AnnotationPropagation	P	GO:0004326	tetrahydrofolylpolyglutamate synthase activity	IBA
GO:0015741	fumarate transport	AnnotationPropagation	P	GO:0005469	succinate:fumarate antiporter activity	IBA
GO:0071422	succinate transmembrane transport	AnnotationPropagation	P	GO:0005469	succinate:fumarate antiporter activity	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	RNA endonuclease activity	IDA
GO:0007186	G protein-coupled receptor signaling pathway	AnnotationPropagation	P	GO:0004930	G protein-coupled receptor activity	IBA
GO:0044322	endoplasmic reticulum quality control compartment	AnnotationPropagation	C	GO:1904380	endoplasmic reticulum mannose trimming	IBA
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004096	catalase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:0071577	zinc ion transmembrane transport	AnnotationPropagation	P	GO:0000006	high-affinity zinc transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0008175	tRNA methyltransferase activity	IBA
GO:0007010	cytoskeleton organization	AnnotationPropagation	P	GO:0005200	structural constituent of cytoskeleton	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0004534	5'-3' RNA exonuclease activity	IDA
GO:0006897	endocytosis	AnnotationPropagation	P	GO:0097020	COPII receptor activity	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0008379	thioredoxin peroxidase activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0035673	oligopeptide transmembrane transporter activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004520	DNA endonuclease activity	IDA
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0043138	3'-5' DNA helicase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IBA
GO:0006366	transcription by RNA polymerase II	AnnotationPropagation	P	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006414	translational elongation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003746	translation elongation factor activity	IBA
GO:0098734	macromolecule depalmitoylation	AnnotationPropagation	P	GO:0008474	palmitoyl-(protein) hydrolase activity	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0035673	oligopeptide transmembrane transporter activity	IBA
GO:1990570	GDP-mannose transmembrane transport	AnnotationPropagation	P	GO:0005458	GDP-mannose transmembrane transporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0046940	nucleoside monophosphate phosphorylation	AnnotationPropagation	P	GO:0004017	adenylate kinase activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070159	mitochondrial threonyl-tRNA aminoacylation	IBA
GO:0015918	sterol transport	AnnotationPropagation	P	GO:0015248	sterol transporter activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IDA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0000213	tRNA-intron endonuclease activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0016149	translation release factor activity, codon specific	IBA
GO:0006415	translational termination	AnnotationPropagation	P	GO:0016149	translation release factor activity, codon specific	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0016149	translation release factor activity, codon specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032979	protein insertion into mitochondrial inner membrane from matrix	IBA
GO:0061727	methylglyoxal catabolic process to lactate	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0019249	lactate biosynthetic process	AnnotationPropagation	P	GO:0019172	glyoxalase III activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IMP
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0034647	histone H3K4me/H3K4me2/H3K4me3 demethylase activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0004535	poly(A)-specific ribonuclease activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0006624	vacuolar protein processing	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0015813	L-glutamate transmembrane transport	AnnotationPropagation	P	GO:0005313	L-glutamate transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0006895	Golgi to endosome transport	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045039	protein insertion into mitochondrial inner membrane	IBA
GO:0070588	calcium ion transmembrane transport	AnnotationPropagation	P	GO:0008331	high voltage-gated calcium channel activity	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0015421	ABC-type oligopeptide transporter activity	IBA
GO:0045892	negative regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0031397	negative regulation of protein ubiquitination	AnnotationPropagation	P	GO:1990948	ubiquitin ligase inhibitor activity	IDA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0005634	nucleus	AnnotationPropagation	C	GO:0071040	nuclear polyadenylation-dependent antisense transcript catabolic process	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140069	histone butyryltransferase activity	IDA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0045040	protein insertion into mitochondrial outer membrane	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0072684	mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0070574	cadmium ion transmembrane transport	AnnotationPropagation	P	GO:0015086	cadmium ion transmembrane transporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0046710	GDP metabolic process	AnnotationPropagation	P	GO:0004385	guanylate kinase activity	IBA
GO:0046037	GMP metabolic process	AnnotationPropagation	P	GO:0004385	guanylate kinase activity	IBA
GO:0046940	nucleoside monophosphate phosphorylation	AnnotationPropagation	P	GO:0004385	guanylate kinase activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0017108	5'-flap endonuclease activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IMP
GO:0032508	DNA duplex unwinding	AnnotationPropagation	P	GO:0003678	DNA helicase activity	IBA
GO:0045892	negative regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0046835	carbohydrate phosphorylation	AnnotationPropagation	P	GO:0003872	6-phosphofructokinase activity	IDA
GO:0061615	glycolytic process through fructose-6-phosphate	AnnotationPropagation	P	GO:0003872	6-phosphofructokinase activity	IDA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034982	mitochondrial protein processing	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0035442	dipeptide transmembrane transport	AnnotationPropagation	P	GO:0071916	dipeptide transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IMP
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:1903710	spermine transmembrane transport	AnnotationPropagation	P	GO:0000297	spermine transmembrane transporter activity	IBA
GO:1903352	L-ornithine transmembrane transport	AnnotationPropagation	P	GO:0000064	L-ornithine transmembrane transporter activity	IBA
GO:1901475	pyruvate transmembrane transport	AnnotationPropagation	P	GO:0050833	pyruvate transmembrane transporter activity	IBA
GO:0017121	plasma membrane phospholipid scrambling	AnnotationPropagation	P	GO:0017128	phospholipid scramblase activity	IBA
GO:0016598	protein arginylation	AnnotationPropagation	P	GO:0004057	arginyltransferase activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0004407	histone deacetylase activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0071897	DNA biosynthetic process	AnnotationPropagation	P	GO:0003887	DNA-directed DNA polymerase activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0004520	DNA endonuclease activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070154	mitochondrial lysyl-tRNA aminoacylation	IBA
GO:0003333	amino acid transmembrane transport	AnnotationPropagation	P	GO:0015171	amino acid transmembrane transporter activity	IBA
GO:0015813	L-glutamate transmembrane transport	AnnotationPropagation	P	GO:0005313	L-glutamate transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015662	P-type ion transporter activity	IMP
GO:1901800	positive regulation of proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004521	RNA endonuclease activity	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0000316	sulfite transport	AnnotationPropagation	P	GO:0000319	sulfite transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0000319	sulfite transmembrane transporter activity	IBA
GO:0051726	regulation of cell cycle	AnnotationPropagation	P	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IDA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0008175	tRNA methyltransferase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0089722	phosphoenolpyruvate transmembrane transport	AnnotationPropagation	P	GO:0089721	phosphoenolpyruvate transmembrane transporter activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140658	ATP-dependent chromatin remodeler activity	IDA
GO:0006366	transcription by RNA polymerase II	AnnotationPropagation	P	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA
GO:0006657	CDP-choline pathway	AnnotationPropagation	P	GO:0004105	choline-phosphate cytidylyltransferase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0015079	potassium ion transmembrane transporter activity	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	protein transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015297	antiporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	AnnotationPropagation	P	GO:0004523	RNA-DNA hybrid ribonuclease activity	IDA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0046834	lipid phosphorylation	AnnotationPropagation	P	GO:0016303	1-phosphatidylinositol-3-kinase activity	IDA
GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process	AnnotationPropagation	P	GO:0016303	1-phosphatidylinositol-3-kinase activity	IDA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0004535	poly(A)-specific ribonuclease activity	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	protein transmembrane transporter activity	IBA
GO:1901800	positive regulation of proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0004407	histone deacetylase activity	IDA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IMP
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IMP
GO:1901475	pyruvate transmembrane transport	AnnotationPropagation	P	GO:0050833	pyruvate transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0071806	protein transmembrane transport	AnnotationPropagation	P	GO:0008320	protein transmembrane transporter activity	IDA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0015851	nucleobase transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	AnnotationPropagation	P	GO:0004535	poly(A)-specific ribonuclease activity	IBA
GO:0042823	pyridoxal phosphate biosynthetic process	AnnotationPropagation	P	GO:0004733	pyridoxamine-phosphate oxidase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0051726	regulation of cell cycle	AnnotationPropagation	P	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000781	chromosome, telomeric region	AnnotationPropagation	C	GO:0031509	subtelomeric heterochromatin formation	IMP
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IBA
GO:1902358	sulfate transmembrane transport	AnnotationPropagation	P	GO:0015116	sulfate transmembrane transporter activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003712	transcription coregulator activity	IBA
GO:0008645	hexose transmembrane transport	AnnotationPropagation	P	GO:0015149	hexose transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0071421	manganese ion transmembrane transport	AnnotationPropagation	P	GO:0005384	manganese ion transmembrane transporter activity	IBA
GO:0071897	DNA biosynthetic process	AnnotationPropagation	P	GO:0003887	DNA-directed DNA polymerase activity	IBA
GO:0034204	lipid translocation	AnnotationPropagation	P	GO:0140326	ATPase-coupled intramembrane lipid transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070124	mitochondrial translational initiation	IMP
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0015837	amine transport	AnnotationPropagation	P	GO:0005275	amine transmembrane transporter activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0005275	amine transmembrane transporter activity	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0015828	tyrosine transport	AnnotationPropagation	P	GO:0005302	L-tyrosine transmembrane transporter activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0005302	L-tyrosine transmembrane transporter activity	IBA
GO:0061025	membrane fusion	AnnotationPropagation	P	GO:0005484	SNAP receptor activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0035672	oligopeptide transmembrane transport	AnnotationPropagation	P	GO:0015421	ABC-type oligopeptide transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0004402	histone acetyltransferase activity	IDA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0034755	iron ion transmembrane transport	AnnotationPropagation	P	GO:0015093	ferrous iron transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0015791	polyol transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0015798	myo-inositol transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0010485	histone H4 acetyltransferase activity	IBA
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	AnnotationPropagation	P	GO:0051500	D-tyrosyl-tRNA(Tyr) deacylase activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0072354	histone H3T3 kinase activity	IBA
GO:0000023	maltose metabolic process	AnnotationPropagation	P	GO:0032450	maltose alpha-glucosidase activity	ISS
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0005227	calcium activated cation channel activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IDA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IDA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0015851	nucleobase transport	AnnotationPropagation	P	GO:0015205	nucleobase transmembrane transporter activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0003747	translation release factor activity	IBA
GO:0006415	translational termination	AnnotationPropagation	P	GO:0003747	translation release factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003747	translation release factor activity	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:0072488	ammonium transmembrane transport	AnnotationPropagation	P	GO:0008519	ammonium transmembrane transporter activity	IBA
GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	AnnotationPropagation	P	GO:0042281	dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0022857	transmembrane transporter activity	IBA
GO:1902358	sulfate transmembrane transport	AnnotationPropagation	P	GO:0015116	sulfate transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0006627	protein processing involved in protein targeting to mitochondrion	IBA
GO:1901800	positive regulation of proteasomal protein catabolic process	AnnotationPropagation	P	GO:0036402	proteasome-activating activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	IBA
GO:0019344	cysteine biosynthetic process	AnnotationPropagation	P	GO:0004124	cysteine synthase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0032543	mitochondrial translation	IBA
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0055085	transmembrane transport	AnnotationPropagation	P	GO:0015662	P-type ion transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0045892	negative regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IDA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003714	transcription corepressor activity	IDA
GO:0006412	translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006413	translational initiation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0006417	regulation of translation	AnnotationPropagation	P	GO:0003743	translation initiation factor activity	IBA
GO:0015791	polyol transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0015798	myo-inositol transport	AnnotationPropagation	P	GO:0005366	myo-inositol:proton symporter activity	IBA
GO:0034204	lipid translocation	AnnotationPropagation	P	GO:0140326	ATPase-coupled intramembrane lipid transporter activity	IBA
GO:1902047	polyamine transmembrane transport	AnnotationPropagation	P	GO:0015203	polyamine transmembrane transporter activity	IBA
GO:0036092	phosphatidylinositol-3-phosphate biosynthetic process	AnnotationPropagation	P	GO:0043813	phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	IBA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007036	vacuolar calcium ion homeostasis	IDA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0010484	histone H3 acetyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070126	mitochondrial translational termination	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0035352	NAD transmembrane transport	AnnotationPropagation	P	GO:0051724	NAD transmembrane transporter activity	IBA
GO:0035433	acetate transmembrane transport	AnnotationPropagation	P	GO:0015123	acetate transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0008175	tRNA methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034551	mitochondrial respiratory chain complex III assembly	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0070125	mitochondrial translational elongation	IC
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0015811	L-cystine transport	AnnotationPropagation	P	GO:0015184	L-cystine transmembrane transporter activity	IBA
GO:1902475	L-alpha-amino acid transmembrane transport	AnnotationPropagation	P	GO:0015184	L-cystine transmembrane transporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IBA
GO:0006750	glutathione biosynthetic process	AnnotationPropagation	P	GO:0004363	glutathione synthase activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IDA
GO:0006096	glycolytic process	AnnotationPropagation	P	GO:0004743	pyruvate kinase activity	IBA
GO:0002943	tRNA dihydrouridine synthesis	AnnotationPropagation	P	GO:0017150	tRNA dihydrouridine synthase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034553	mitochondrial respiratory chain complex II assembly	IBA
GO:0006591	ornithine metabolic process	AnnotationPropagation	P	GO:0004585	ornithine carbamoyltransferase activity	IBA
GO:0071421	manganese ion transmembrane transport	AnnotationPropagation	P	GO:0005384	manganese ion transmembrane transporter activity	IBA
GO:0071934	thiamine transmembrane transport	AnnotationPropagation	P	GO:0015234	thiamine transmembrane transporter activity	IBA
GO:0051726	regulation of cell cycle	AnnotationPropagation	P	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IDA
GO:0005773	vacuole	AnnotationPropagation	C	GO:0007039	protein catabolic process in the vacuole	IBA
GO:0030488	tRNA methylation	AnnotationPropagation	P	GO:0016300	tRNA (uracil) methyltransferase activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0042407	cristae formation	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0034219	carbohydrate transmembrane transport	AnnotationPropagation	P	GO:0005351	carbohydrate:proton symporter activity	IBA
GO:0005829	cytosol	AnnotationPropagation	C	GO:0042147	retrograde transport, endosome to Golgi	IMP
GO:0015914	phospholipid transport	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0120009	intermembrane lipid transfer	AnnotationPropagation	P	GO:0008526	phosphatidylinositol transfer activity	IBA
GO:0006355	regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003700	DNA-binding transcription factor activity	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0008296	3'-5'-DNA exonuclease activity	IBA
GO:0098655	monoatomic cation transmembrane transport	AnnotationPropagation	P	GO:0005227	calcium activated cation channel activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0004402	histone acetyltransferase activity	IBA
GO:0022900	electron transport chain	AnnotationPropagation	P	GO:0009055	electron transfer activity	IBA
GO:0006412	translation	AnnotationPropagation	P	GO:0030533	triplet codon-amino acid adaptor activity	ISM
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0046970	NAD-dependent histone H4K16 deacetylase activity	IBA
GO:0071805	potassium ion transmembrane transport	AnnotationPropagation	P	GO:0015079	potassium ion transmembrane transporter activity	IBA
GO:0005737	cytoplasm	AnnotationPropagation	C	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0034553	mitochondrial respiratory chain complex II assembly	IBA
GO:1902358	sulfate transmembrane transport	AnnotationPropagation	P	GO:0015116	sulfate transmembrane transporter activity	IBA
GO:0006338	chromatin remodeling	AnnotationPropagation	P	GO:0140658	ATP-dependent chromatin remodeler activity	IDA
GO:0071577	zinc ion transmembrane transport	AnnotationPropagation	P	GO:0005385	zinc ion transmembrane transporter activity	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0045893	positive regulation of DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0003713	transcription coactivator activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006259	DNA metabolic process	AnnotationPropagation	P	GO:0035312	5'-3' DNA exonuclease activity	IBA
GO:1902600	proton transmembrane transport	AnnotationPropagation	P	GO:0015295	solute:proton symporter activity	IBA
GO:0015718	monocarboxylic acid transport	AnnotationPropagation	P	GO:0015355	secondary active monocarboxylate transmembrane transporter activity	IBA
GO:1905039	carboxylic acid transmembrane transport	AnnotationPropagation	P	GO:0015355	secondary active monocarboxylate transmembrane transporter activity	IBA
GO:0006457	protein folding	AnnotationPropagation	P	GO:0044183	protein folding chaperone	IBA
GO:0005739	mitochondrion	AnnotationPropagation	C	GO:0033617	mitochondrial cytochrome c oxidase assembly	IBA
GO:0098869	cellular oxidant detoxification	AnnotationPropagation	P	GO:0004096	catalase activity	IBA
GO:0006357	regulation of transcription by RNA polymerase II	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0006351	DNA-templated transcription	AnnotationPropagation	P	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0071423	malate transmembrane transport	AnnotationPropagation	P	GO:0015140	malate transmembrane transporter activity	IBA
GO:0006913	nucleocytoplasmic transport	AnnotationPropagation	P	GO:0017056	structural constituent of nuclear pore	IBA
GO:0000025	maltose catabolic process	FoldBasedPredictor	GO:0032450	maltose alpha-glucosidase activity	part_of	GO:0000025	maltose catabolic process	ISS
GO:0042764	ascospore-type prospore	FoldBasedPredictor	GO:0005829	cytosol	part_of	GO:0042764	ascospore-type prospore	IDA
GO:0000421	autophagosome membrane	FoldBasedPredictor	GO:1904053	positive regulation of protein targeting to vacuole involved in autophagy	has_input	SGD:S000001679		occurs_in	GO:0000421	autophagosome membrane	IMP
GO:2000911	positive regulation of sterol import	FoldBasedPredictor	GO:0045944	positive regulation of transcription by RNA polymerase II	part_of	GO:2000911	positive regulation of sterol import	IMP
GO:0071281	cellular response to iron ion	FoldBasedPredictor	GO:0000122	negative regulation of transcription by RNA polymerase II	part_of	GO:0071281	cellular response to iron ion	IGI
GO:0071444	cellular response to pheromone	FoldBasedPredictor	GO:0000122	negative regulation of transcription by RNA polymerase II	part_of	GO:0071444	cellular response to pheromone	IGI
GO:0071444	cellular response to pheromone	FoldBasedPredictor	GO:0000122	negative regulation of transcription by RNA polymerase II	part_of	GO:0071444	cellular response to pheromone	IGI
GO:0051668	localization within membrane	FoldBasedPredictor	GO:0031503	protein-containing complex localization	transports_or_maintains_localization_of	GO:0044695	Dsc E3 ubiquitin ligase complex	has_target_end_location	GO:0000329	fungal-type vacuole membrane	IMP
GO:0005634	nucleus	FoldBasedPredictor	GO:0003700	DNA-binding transcription factor activity	occurs_in	GO:0005634	nucleus	part_of	GO:0006355	regulation of DNA-templated transcription	ISS
GO:0031496	positive regulation of mating type switching	FoldBasedPredictor	GO:0045944	positive regulation of transcription by RNA polymerase II	part_of	GO:0031496	positive regulation of mating type switching	IGI
GO:0140067	peptidyl-lysine butyrylation	FoldBasedPredictor	GO:0140069	histone butyryltransferase activity	part_of	GO:0140067	peptidyl-lysine butyrylation	IDA
GO:1901522	positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus	FoldBasedPredictor	GO:0045944	positive regulation of transcription by RNA polymerase II	part_of	GO:0071475	cellular hyperosmotic salinity response	IMP
GO:0071475	cellular hyperosmotic salinity response	FoldBasedPredictor	GO:0045944	positive regulation of transcription by RNA polymerase II	part_of	GO:0071475	cellular hyperosmotic salinity response	IMP
GO:2001280	positive regulation of unsaturated fatty acid biosynthetic process	FoldBasedPredictor	GO:0045944	positive regulation of transcription by RNA polymerase II	part_of	GO:2001280	positive regulation of unsaturated fatty acid biosynthetic process	IGI
GO:0005886	plasma membrane	FoldBasedPredictor	GO:0032781	positive regulation of ATP-dependent activity	occurs_in	GO:0005886	plasma membrane	IGI
GO:2000222	positive regulation of pseudohyphal growth	FoldBasedPredictor	GO:0045944	positive regulation of transcription by RNA polymerase II	part_of	GO:2000222	positive regulation of pseudohyphal growth	IMP