Table of contents

Summary

GAF summary

Found 227648 annotations in 227672 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 2 violations with type Warning.

For rule GO_AR:0000007 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000007) IPI should not be used with catalytic activity molecular function terms, there are 2 violations with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 35 violations with type Warning.

GAF Prediction Summary

Found 2651 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf    go/releases/2019-06-28/extensions/go-gaf.owl

Report

Group: zfin - Dataset: zfin

SUMMARY

This report generated on 2019-07-01

Header From Original Association File

!gaf_version: 2.1
!Version: 1.822
!Date: 2019/07/01
!From: ZFIN (zfin.org)
!

Contents

gorule-0000008

gorule-0000027

gorule-0000033

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000027

Each identifier in GAF is valid

Messages

gorule-0000033

Public Reference IDs (PMID, PMC, doi, or GO_REF) should be preferred over group specific Reference IDs

Messages