Shared Annotation Check

Tools and rules for intersections/co-annotation checks in the Gene Ontology. Latest raw output on build server.

Looked at 107 rules.
Skipped 2 rules when making annotation summary due to size.

For remaining annotation summary, found 3847 total erring annotation(s) with 0 EXP annotation(s) and 0 IEA annotation(s).

Exited with 76 broken rule(s).

Compiled and published on 2024-04-19T13:06:39.281Z.

Rule check data

No.Rule summaryDescriptionPass?GP countAnn. details
No.Rule summaryDescriptionPass?GP countAnn. details
1GO:0006520 && GO:0006310amino acid metabolic process
GO:0006310
fail1all: 7; exp: 0; iea: 0
annotation link
2GO:0006520 && GO:0006281amino acid metabolic process
DNA repair
fail2all: 10; exp: 0; iea: 0
annotation link
3GO:0006520 && GO:0006260amino acid metabolic process
DNA replication
pass0-
4GO:0006520 && GO:0030437amino acid metabolic process
ascospore formation
pass0-
5GO:0006520 && GO:0007155 && !(GO:0017101)amino acid metabolic process
cell adhesion
!   aminoacyl-tRNA synthetase multienzyme complex
fail7all: 21; exp: 0; iea: 0
annotation link
6GO:0006520 && GO:0071554amino acid metabolic process
cell wall organization or biogenesis
fail23all: 62; exp: 0; iea: 0
annotation link
7GO:0006520 && GO:0000070amino acid metabolic process
mitotic sister chromatid segregation
fail6all: 12; exp: 0; iea: 0
annotation link
8GO:0006520 && GO:0051186 && !(GO:0034628 || GO:0034354 || GO:0019442 || GO:0008705)amino acid metabolic process
obsolete cofactor metabolic process
!   'de novo' NAD biosynthetic process from aspartate
!   'de novo' NAD biosynthetic process from tryptophan
!   tryptophan catabolic process to acetyl-CoA
!   methionine synthase activity
pass0-
9GO:0006520 && GO:0000747amino acid metabolic process
conjugation with cellular fusion
pass0-
10GO:0006520 && GO:0000910amino acid metabolic process
cytokinesis
pass0-
11GO:0006520 && GO:0002181 && !(GO:0043039 || GO:0003994)amino acid metabolic process
cytoplasmic translation
!   tRNA aminoacylation
!   aconitate hydratase activity
fail7all: 23; exp: 0; iea: 0
annotation link
12GO:0006520 && GO:0007010 && !(MGI:107537)amino acid metabolic process
cytoskeleton organization
!   MGI:107537
fail9all: 29; exp: 0; iea: 0
annotation link
13GO:0006520 && GO:0016071 && !(MGI:1338011)amino acid metabolic process
mRNA metabolic process
!   MGI:1338011
fail6all: 13; exp: 0; iea: 0
annotation link
14GO:0006520 && GO:0007126amino acid metabolic process
GO:0007126
pass0-
15GO:0006520 && GO:0006913amino acid metabolic process
nucleocytoplasmic transport
fail1all: 4; exp: 0; iea: 0
annotation link
16GO:0006520 && GO:0007031 && !(WB:WBGene00006946)amino acid metabolic process
peroxisome organization
!   WB:WBGene00006946
fail6all: 31; exp: 0; iea: 0
annotation link
17GO:0006520 && GO:0006486 && !(GO:0003950)amino acid metabolic process
protein glycosylation
!   NAD+ ADP-ribosyltransferase activity
fail28all: 63; exp: 0; iea: 0
annotation link
18GO:0006520 && GO:0006605 && !(WB:WBGene00006946)amino acid metabolic process
protein targeting
!   WB:WBGene00006946
fail24all: 93; exp: 0; iea: 0
annotation link
19GO:0006520 && GO:1901990amino acid metabolic process
regulation of mitotic cell cycle phase transition
fail7all: 44; exp: 0; iea: 0
annotation link
20GO:0006520 && GO:0042254amino acid metabolic process
ribosome biogenesis
fail18all: 82; exp: 0; iea: 0
annotation link
21GO:0006520 && GO:0006399 && !(GO:0043039 || GO:0031071)amino acid metabolic process
tRNA metabolic process
!   tRNA aminoacylation
!   cysteine desulfurase activity
fail27all: 153; exp: 0; iea: 0
annotation link
22GO:0006399 && GO:0006310 && !(GO:0045190)tRNA metabolic process
DNA recombination
!   isotype switching
fail23all: 73; exp: 0; iea: 0
annotation link
23GO:0006399 && GO:0030437tRNA metabolic process
ascospore formation
pass0-
24GO:0006399 && GO:0005975tRNA metabolic process
carbohydrate metabolic process
pass0-
25GO:0006399 && GO:0007155tRNA metabolic process
cell adhesion
pass0-
26GO:0006399 && GO:0071554tRNA metabolic process
cell wall organization or biogenesis
fail3all: 8; exp: 0; iea: 0
annotation link
27GO:0006399 && GO:0007059tRNA metabolic process
chromosome segregation
fail7all: 19; exp: 0; iea: 0
annotation link
28GO:0006399 && GO:0051186 && !(GO:0002143 || GO:0070733 || GO:0004792 || GO:0006777)tRNA metabolic process
obsolete cofactor metabolic process
!   tRNA wobble position uridine thiolation
!   AMPylase activity
!   thiosulfate sulfurtransferase activity
!   Mo-molybdopterin cofactor biosynthetic process
pass0-
29GO:0006399 && GO:0000747tRNA metabolic process
conjugation with cellular fusion
pass0-
30GO:0006399 && GO:0000910tRNA metabolic process
cytokinesis
fail1all: 4; exp: 0; iea: 0
annotation link
31GO:0006399 && GO:0002181 && !(GO:0004812)tRNA metabolic process
cytoplasmic translation
!   aminoacyl-tRNA ligase activity
fail146not available due to size (>100)
32GO:0006399 && GO:0007010tRNA metabolic process
cytoskeleton organization
fail5all: 10; exp: 0; iea: 0
annotation link
33GO:0006399 && GO:0006091tRNA metabolic process
generation of precursor metabolites and energy
fail1all: 2; exp: 0; iea: 0
annotation link
34GO:0006399 && GO:0006629tRNA metabolic process
lipid metabolic process
fail19all: 157; exp: 0; iea: 0
annotation link
35GO:0006399 && GO:0007126tRNA metabolic process
GO:0007126
pass0-
36GO:0006399 && GO:0061024tRNA metabolic process
membrane organization
fail5all: 12; exp: 0; iea: 0
annotation link
37GO:0006399 && GO:0071941tRNA metabolic process
nitrogen cycle metabolic process
pass0-
38GO:0006399 && GO:0055086 && !(GO:0004820)tRNA metabolic process
nucleobase-containing small molecule metabolic process
!   glycine-tRNA ligase activity
fail113not available due to size (>100)
39GO:0006399 && GO:0006913tRNA metabolic process
nucleocytoplasmic transport
fail17all: 108; exp: 0; iea: 0
annotation link
40GO:0006399 && GO:0007031 && !(WB:WBGene00006946)tRNA metabolic process
peroxisome organization
!   WB:WBGene00006946
pass0-
41GO:0006399 && GO:0030163tRNA metabolic process
protein catabolic process
fail6all: 17; exp: 0; iea: 0
annotation link
42GO:0006399 && GO:0006461tRNA metabolic process
GO:0006461
pass0-
43GO:0006399 && GO:0006457tRNA metabolic process
protein folding
fail5all: 18; exp: 0; iea: 0
annotation link
44GO:0006399 && GO:0006486tRNA metabolic process
protein glycosylation
fail3all: 16; exp: 0; iea: 0
annotation link
45GO:0006399 && GO:0051604tRNA metabolic process
protein maturation
fail14all: 40; exp: 0; iea: 0
annotation link
46GO:0006399 && GO:0006605 && !(WB:WBGene00006946)tRNA metabolic process
protein targeting
!   WB:WBGene00006946
fail13all: 53; exp: 0; iea: 0
annotation link
47GO:0006399 && GO:1901990tRNA metabolic process
regulation of mitotic cell cycle phase transition
fail7all: 14; exp: 0; iea: 0
annotation link
48GO:0006399 && GO:0055085 && !(WB:WBGene00006946)tRNA metabolic process
transmembrane transport
!   WB:WBGene00006946
fail23all: 76; exp: 0; iea: 0
annotation link
49GO:0006399 && GO:0007033tRNA metabolic process
vacuole organization
pass0-
50GO:0006399 && GO:0016192tRNA metabolic process
vesicle-mediated transport
fail11all: 31; exp: 0; iea: 0
annotation link
51GO:0006399 && GO:0006766 && !(GO:0009982)tRNA metabolic process
vitamin metabolic process
!   pseudouridine synthase activity
fail4all: 25; exp: 0; iea: 0
annotation link
52GO:0002181 && GO:0006310cytoplasmic translation
DNA recombination
fail2all: 5; exp: 0; iea: 0
annotation link
53GO:0002181 && GO:0006281cytoplasmic translation
DNA repair
fail9all: 28; exp: 0; iea: 0
annotation link
54GO:0002181 && GO:0006260cytoplasmic translation
DNA replication
fail3all: 13; exp: 0; iea: 0
annotation link
55GO:0002181 && GO:0030437cytoplasmic translation
ascospore formation
pass0-
56GO:0002181 && GO:0005975cytoplasmic translation
carbohydrate metabolic process
fail2all: 5; exp: 0; iea: 0
annotation link
57GO:0002181 && GO:0007155cytoplasmic translation
cell adhesion
fail11all: 38; exp: 0; iea: 0
annotation link
58GO:0002181 && GO:0071554cytoplasmic translation
cell wall organization or biogenesis
fail2all: 5; exp: 0; iea: 0
annotation link
59GO:0002181 && GO:0006325cytoplasmic translation
chromatin organization
fail7all: 31; exp: 0; iea: 0
annotation link
60GO:0002181 && GO:0007059cytoplasmic translation
chromosome segregation
fail4all: 14; exp: 0; iea: 0
annotation link
61GO:0002181 && GO:0051186cytoplasmic translation
obsolete cofactor metabolic process
pass0-
62GO:0002181 && GO:0000747cytoplasmic translation
conjugation with cellular fusion
fail2all: 4; exp: 0; iea: 0
annotation link
63GO:0002181 && GO:0000910cytoplasmic translation
cytokinesis
pass0-
64GO:0002181 && GO:0007010cytoplasmic translation
cytoskeleton organization
fail14all: 53; exp: 0; iea: 0
annotation link
65GO:0002181 && GO:0006091cytoplasmic translation
generation of precursor metabolites and energy
fail1all: 4; exp: 0; iea: 0
annotation link
66GO:0002181 && GO:0006629cytoplasmic translation
lipid metabolic process
fail4all: 11; exp: 0; iea: 0
annotation link
67GO:0002181 && GO:0007126cytoplasmic translation
GO:0007126
pass0-
68GO:0002181 && GO:0071941cytoplasmic translation
nitrogen cycle metabolic process
pass0-
69GO:0002181 && GO:0055086 && !(GO:0004820)cytoplasmic translation
nucleobase-containing small molecule metabolic process
!   glycine-tRNA ligase activity
fail5all: 19; exp: 0; iea: 0
annotation link
70GO:0002181 && GO:0007031cytoplasmic translation
peroxisome organization
pass0-
71GO:0002181 && GO:0030163cytoplasmic translation
protein catabolic process
fail40all: 113; exp: 0; iea: 0
annotation link
72GO:0002181 && GO:0006461 && !(GO:0097010 || GO:0001731)cytoplasmic translation
GO:0006461
!   eukaryotic translation initiation factor 4F complex assembly
!   formation of translation preinitiation complex
pass0-
73GO:0002181 && GO:0006486cytoplasmic translation
protein glycosylation
fail3all: 15; exp: 0; iea: 0
annotation link
74GO:0002181 && GO:0051604cytoplasmic translation
protein maturation
fail28all: 121; exp: 0; iea: 0
annotation link
75GO:0002181 && GO:0006605 && !(WB:WBGene00006946)cytoplasmic translation
protein targeting
!   WB:WBGene00006946
fail6all: 19; exp: 0; iea: 0
annotation link
76GO:0002181 && GO:0055085cytoplasmic translation
transmembrane transport
fail4all: 11; exp: 0; iea: 0
annotation link
77GO:0002181 && GO:0007033cytoplasmic translation
vacuole organization
fail2all: 5; exp: 0; iea: 0
annotation link
78GO:0002181 && GO:0016192cytoplasmic translation
vesicle-mediated transport
fail4all: 11; exp: 0; iea: 0
annotation link
79GO:0002181 && GO:0006766cytoplasmic translation
vitamin metabolic process
pass0-
80GO:0042254 && GO:0030437ribosome biogenesis
ascospore formation
fail10all: 42; exp: 0; iea: 0
annotation link
81GO:0042254 && GO:0005975ribosome biogenesis
carbohydrate metabolic process
fail12all: 45; exp: 0; iea: 0
annotation link
82GO:0042254 && GO:0071554ribosome biogenesis
cell wall organization or biogenesis
fail31all: 135; exp: 0; iea: 0
annotation link
83GO:0042254 && GO:0051186ribosome biogenesis
obsolete cofactor metabolic process
pass0-
84GO:0042254 && GO:0000747ribosome biogenesis
conjugation with cellular fusion
fail2all: 9; exp: 0; iea: 0
annotation link
85GO:0042254 && GO:0000910ribosome biogenesis
cytokinesis
fail14all: 50; exp: 0; iea: 0
annotation link
86GO:0042254 && GO:0007126ribosome biogenesis
GO:0007126
pass0-
87GO:0042254 && GO:0055086ribosome biogenesis
nucleobase-containing small molecule metabolic process
fail46all: 189; exp: 0; iea: 0
annotation link
88GO:0042254 && GO:0006461ribosome biogenesis
GO:0006461
pass0-
89GO:0042254 && GO:0006457ribosome biogenesis
protein folding
fail53all: 200; exp: 0; iea: 0
annotation link
90GO:0042254 && GO:0006486ribosome biogenesis
protein glycosylation
fail16all: 57; exp: 0; iea: 0
annotation link
91GO:0042254 && GO:0051604ribosome biogenesis
protein maturation
fail74all: 258; exp: 0; iea: 0
annotation link
92GO:0042254 && GO:0055085ribosome biogenesis
transmembrane transport
fail76all: 419; exp: 0; iea: 0
annotation link
93GO:0042254 && GO:0007033ribosome biogenesis
vacuole organization
fail9all: 19; exp: 0; iea: 0
annotation link
94GO:0042254 && GO:0006766ribosome biogenesis
vitamin metabolic process
fail3all: 12; exp: 0; iea: 0
annotation link
95GO:0006260 && GO:0051186DNA replication
obsolete cofactor metabolic process
pass0-
96GO:0006260 && GO:0000747DNA replication
conjugation with cellular fusion
fail1all: 4; exp: 0; iea: 0
annotation link
97GO:0006260 && GO:0000910DNA replication
cytokinesis
fail10all: 35; exp: 0; iea: 0
annotation link
98GO:0006260 && GO:0006091DNA replication
generation of precursor metabolites and energy
fail8all: 16; exp: 0; iea: 0
annotation link
99GO:0006260 && GO:0006629DNA replication
lipid metabolic process
fail6all: 22; exp: 0; iea: 0
annotation link
100GO:0006260 && GO:0006913DNA replication
nucleocytoplasmic transport
fail19all: 116; exp: 0; iea: 0
annotation link
101GO:0006260 && GO:0007031DNA replication
peroxisome organization
pass0-
102GO:0006260 && GO:0006486DNA replication
protein glycosylation
pass0-
103GO:0006260 && GO:0051604DNA replication
protein maturation
fail33all: 106; exp: 0; iea: 0
annotation link
104GO:0006260 && GO:0006605DNA replication
protein targeting
fail9all: 27; exp: 0; iea: 0
annotation link
105GO:0006260 && GO:0055085DNA replication
transmembrane transport
fail4all: 17; exp: 0; iea: 0
annotation link
106GO:0006260 && GO:0006766DNA replication
vitamin metabolic process
pass0-
107GO:0006913 && GO:0055085nucleocytoplasmic transport
transmembrane transport
fail41all: 214; exp: 0; iea: 0
annotation link

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