Table of contents

Summary

GAF summary

Found 26628 annotations in 26636 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000001 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000001) Basic GAF checks, there are 18 violations with type Error.

For rule GO_AR:0000005 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000005) No ISS or ISS-related annotations to 'protein binding ; GO:0005515', there are 16 violations with type Error.

For rule GO_AR:0000011 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000011) ND annotations to root nodes only, there are 60 violations with type Error.

For rule GO_AR:0000003 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000003) Annotations to 'binding ; GO:0005488' and 'protein binding ; GO:0005515' should be made with IPI and an interactor in the 'with' field, there are 17 violations with type Warning.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 68 violations with type Warning.

For rule GO_AR:0000011 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000011) ND annotations to root nodes only, there are 24315 violations with type Warning.

GAF Prediction Summary

Found 34 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf    go/releases/2019-06-28/extensions/go-gaf.owl

Report

Group: pamgo - Dataset: pamgo_mgrisea

SUMMARY

This report generated on 2019-07-01

Header From Original Association File

Contents

gorule-0000008

gorule-0000018

gorule-0000020

gorule-0000027

gorule-0000029

gorule-0000033

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages

gorule-0000018

IPI annotations require a With/From entry

Messages

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000027

Each identifier in GAF is valid

Messages