Group: paint - Dataset: paint_sgd

SUMMARY

This report generated on 2024-09-10

Associations: 15329
Lines in file (incl headers): 15351
Lines skipped: 16

Header From Original Association File

!gaf-version: 2.2
!Created on Fri Aug 2 12:47:19 2024.
!generated-by: PANTHER
!date-generated: 2024-08-02
!PANTHER version: v.17.0.
!GO version: 2024-06-17.

MESSAGES

gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

total: 0

gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

total: 0

gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

total: 0

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

total: 0

gorule-0000008

No annotations should be made to uninformative high level terms

total: 10

Messages

WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000001584 HSL1 involved_in GO:0007093 GO_REF:0000033 IBA PANTHER:PTN008613667|SGD:S000002915|SGD:S000000529|SGD:S000001584|UniProtKB:Q8TDC3 P Probable serine/threonine-protein kinase HSL1 UniProtKB:P34244|PTN000681677 protein taxon:559292 20240321 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000003455 HSV2 involved_in GO:0030242 GO_REF:0000033 IBA PANTHER:PTN000132136|SGD:S000001917 P SVP1-like protein 2 UniProtKB:P50079|PTN000132322 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000006021 ATG21 involved_in GO:0030242 GO_REF:0000033 IBA PANTHER:PTN000132136|SGD:S000001917 P Autophagy-related protein 21 UniProtKB:Q02887|PTN000132226 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000004230 VPS34 involved_in GO:0030242 GO_REF:0000033 IBA PANTHER:PTN000005955|SGD:S000004230 P Phosphatidylinositol 3-kinase VPS34 UniProtKB:P22543|PTN000005997 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000001917 ATG18 involved_in GO:0030242 GO_REF:0000033 IBA PANTHER:PTN000132136|SGD:S000001917 P Autophagy-related protein 18 UniProtKB:P43601|PTN000132229 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000006024 FMP30 is_active_in GO:0043227 GO_REF:0000033 IBA PANTHER:PTN001806046|UniProtKB:Q6IQ20|SGD:S000006024|MGI:MGI:2140885|UniProtKB:Q58CN9 C N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D, mitochondrial UniProtKB:Q02883|PTN001280874 protein taxon:559292 20240730 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000000529 KCC4 involved_in GO:0007093 GO_REF:0000033 IBA PANTHER:PTN008613667|SGD:S000002915|SGD:S000000529|SGD:S000001584|UniProtKB:Q8TDC3 P Probable serine/threonine-protein kinase KCC4 UniProtKB:P25389|PTN000680255 protein taxon:559292 20240321 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000004415 ATG17 involved_in GO:0030242 GO_REF:0000033 IBA PANTHER:PTN001997259|SGD:S000004415 P Autophagy-related protein 17 UniProtKB:Q06410|PTN001997266 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000000132 YBL036C is_active_in GO:0005622 GO_REF:0000033 IBA PANTHER:PTN000015833|UniProtKB:P67080|UniProtKB:Q57VD5|UniProtKB:O94903 C Pyridoxal phosphate homeostasis protein UniProtKB:P38197|PTN000015876 protein taxon:559292 20200929 GO_Central
WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- SGD S000002915 GIN4 involved_in GO:0007093 GO_REF:0000033 IBA PANTHER:PTN008613667|SGD:S000002915|SGD:S000000529|SGD:S000001584|UniProtKB:Q8TDC3 P Serine/threonine-protein kinase GIN4 UniProtKB:Q12263|PTN000679727 protein taxon:559292 20240321 GO_Central

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

total: 0

gorule-0000013

Taxon-appropriate annotation check

total: 13

Messages

ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000003034 SGF73 involved_in GO:0031048 GO_REF:0000033 IBA PANTHER:PTN001031589|PomBase:SPCC126.04c P SAGA-associated factor 73 UniProtKB:P53165|PTN000387891 protein taxon:559292 20240213 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000002450 NRG1 part_of GO:0031519 GO_REF:0000033 IBA PANTHER:PTN000360827|FB:FBgn0002521|MGI:MGI:99150 C Transcriptional regulator NRG1 UniProtKB:Q03125|PTN000149122 protein taxon:559292 20170602 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000002542 YCF1 enables GO:0015127 GO_REF:0000033 IBA PANTHER:PTN001200390|SGD:S000003938|SGD:S000002542 F Metal resistance protein YCF1 UniProtKB:P39109|PTN000658409 protein taxon:559292 20170228 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000003930 LMO1 involved_in GO:0048870 GO_REF:0000033 IBA PANTHER:PTN000299186|UniProtKB:Q96JJ3|FB:FBgn0032409|UniProtKB:Q92556|WB:WBGene00000426|dictyBase:DDB_G0278051 P ELMO family protein LMO1 UniProtKB:Q07799|PTN001764799 protein taxon:559292 20221007 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000002180 GPD1 enables GO:0047952 GO_REF:0000033 IBA PANTHER:PTN000919759|SGD:S000005420|MGI:MGI:95679|SGD:S000002180|PomBase:SPBC215.05|UniProtKB:C8VTT9 F Glycerol-3-phosphate dehydrogenase [NAD(+)] 1 UniProtKB:Q00055|PTN000198091 protein taxon:559292 20240729 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000001612 MYO3 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:P47807|UniProtKB:Q9UBC5|MGI:MGI:1927091|MGI:MGI:107732|UniProtKB:O00159 C Myosin-3 UniProtKB:P36006|PTN000321838 protein taxon:559292 20240205 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000000270 NRG2 part_of GO:0031519 GO_REF:0000033 IBA PANTHER:PTN000360827|FB:FBgn0002521|MGI:MGI:99150 C Probable transcriptional regulator NRG2 UniProtKB:P38082|PTN000360882 protein taxon:559292 20170602 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000005420 GPD2 enables GO:0047952 GO_REF:0000033 IBA PANTHER:PTN000919759|SGD:S000005420|MGI:MGI:95679|SGD:S000002180|PomBase:SPBC215.05|UniProtKB:C8VTT9 F Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, mitochondrial UniProtKB:P41911|PTN000198092 protein taxon:559292 20240729 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000005072 TEP1 involved_in GO:0048870 GO_REF:0000033 IBA PANTHER:PTN000959472|dictyBase:DDB_G0286557|MGI:MGI:109583 P Probable phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TEP1 UniProtKB:P53916|PTN000266993 protein taxon:559292 20200305 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000004715 MYO5 is_active_in GO:0005902 GO_REF:0000033 IBA PANTHER:PTN001406997|UniProtKB:P47807|UniProtKB:Q9UBC5|MGI:MGI:1927091|MGI:MGI:107732|UniProtKB:O00159 C Myosin-5 UniProtKB:Q04439|PTN000321837 protein taxon:559292 20240205 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000004460 YPT7 is_active_in GO:0045335 GO_REF:0000033 IBA PANTHER:PTN000635769|WB:WBGene00004271|MGI:MGI:2442295|dictyBase:DDB_G0269236|UniProtKB:Q96AH8|UniProtKB:Q9NP90|UniProtKB:P51151|UniProtKB:P51149 C Ypt/Rab-type GTPase YPT7 UniProtKB:P32939|PTN000635835 protein taxon:559292 20201002 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000003938 BPT1 enables GO:0015127 GO_REF:0000033 IBA PANTHER:PTN001200390|SGD:S000003938|SGD:S000002542 F Bile pigment transporter 1 UniProtKB:P14772|PTN000658408 protein taxon:559292 20170228 GO_Central
ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- SGD S000000514 STP22 involved_in GO:0008333 GO_REF:0000033 IBA PANTHER:PTN000592420|RGD:3909|WB:WBGene00015658 P Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease UniProtKB:P25604|PTN000592498 protein taxon:559292 20211108 GO_Central

gorule-0000015

Dual species taxon check

total: 0

gorule-0000016

With/From: IC annotations require a With/From GO ID

total: 0

gorule-0000017

IDA annotations must not have a With/From entry

total: 0

gorule-0000018

IPI annotations require a With/From entry

total: 0

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

total: 44

Messages

ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0003867) -- SGD S000003251 UGA1 enables GO:0003867 GO_REF:0000033 IBA PANTHER:PTN000944876|UniProtKB:P50457|SGD:S000003251|RGD:620948|UniProtKB:P80404|PomBase:SPAC19D5.07|UniProtKB:P22256|UniProtKB:P94427 F 4-aminobutyrate aminotransferase UniProtKB:P17649|PTN000241277 protein taxon:559292 20240212 GO_Central
ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035308) -- SGD S000005101 IGO1 involved_in GO:0035308 GO_REF:0000033 IBA PANTHER:PTN001309504|SGD:S000005101 P mRNA stability protein IGO1 UniProtKB:P53897|PTN000820577 protein taxon:559292 20230602 GO_Central
ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035308) -- SGD S000007496 IGO2 involved_in GO:0035308 GO_REF:0000033 IBA PANTHER:PTN001309504|SGD:S000005101 P mRNA stability protein IGO2 UniProtKB:Q9P305|PTN000820578 protein taxon:559292 20230602 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000275) -- SGD S000002162 ATP16 part_of GO:0000275 GO_REF:0000033 IBA PANTHER:PTN000352457|TAIR:locus:2171022|UniProtKB:Q586H1|SGD:S000002162 C ATP synthase subunit delta, mitochondrial UniProtKB:Q12165|PTN000352502 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000276) -- SGD S000007267 ATP8 part_of GO:0000276 GO_REF:0000033 IBA PANTHER:PTN002188719|UniProtKB:P0CY41 C ATP synthase protein 8 UniProtKB:P00856|PTN002188726 protein taxon:559292 20240801 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000276) -- SGD S000007274 OLI1 part_of GO:0000276 GO_REF:0000033 IBA PANTHER:PTN000003243|UniProtKB:Q57WQ3 C ATP synthase subunit 9, mitochondrial UniProtKB:P61829|PTN000003355 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0003721) -- SGD S000004310 EST2 enables GO:0003721 GO_REF:0000033 IBA PANTHER:PTN000249074|CGD:CAL0000184329|UniProtKB:O14746|PomBase:SPBC29A3.14c|SGD:S000004310|UniProtKB:Q1PS67 F Telomerase reverse transcriptase UniProtKB:Q06163|PTN000249115 protein taxon:559292 20200808 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004024) -- SGD S000002327 SFA1 enables GO:0004024 GO_REF:0000033 IBA PANTHER:PTN000191653|MGI:MGI:1349472|UniProtKB:P07327|UniProtKB:P25437|UniProtKB:P00325|UniProtKB:P08319|UniProtKB:P40394 F S-(hydroxymethyl)glutathione dehydrogenase UniProtKB:P32771|PTN000191794 protein taxon:559292 20181004 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004310) -- SGD S000001233 ERG9 enables GO:0004310 GO_REF:0000033 IBA PANTHER:PTN001700951|RGD:61834|TAIR:locus:2139514|PomBase:SPBC646.05c|SGD:S000001233 F Squalene synthase UniProtKB:P29704|PTN000179323 protein taxon:559292 20200807 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005746) -- SGD S000005301 RCF2 part_of GO:0005746 GO_REF:0000033 IBA PANTHER:PTN001997468|PomBase:SPAC1565.01 C Respiratory supercomplex factor 2, mitochondrial UniProtKB:P53721|PTN001997478 protein taxon:559292 20240731 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000003702 QCR8 part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000950370|UniProtKB:O14949 C Cytochrome b-c1 complex subunit 8, mitochondrial UniProtKB:P08525|PTN000950391 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000005591 CYT1 part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000030137|UniProtKB:P08574 C Cytochrome c1, heme protein, mitochondrial UniProtKB:P07143|PTN000030178 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000002937 QCR7 part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000246311|UniProtKB:P14927|UniProtKB:Q871K1 C Cytochrome b-c1 complex subunit 7, mitochondrial UniProtKB:P00128|PTN000246362 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000001929 QCR6 part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000393767|UniProtKB:P07919 C Cytochrome b-c1 complex subunit 6, mitochondrial UniProtKB:P00127|PTN000393814 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000003415 QCR9 part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000312316|UniProtKB:Q9UDW1 C Cytochrome b-c1 complex subunit 9, mitochondrial UniProtKB:P22289|PTN000312353 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000000750 RIP1 part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000015359|UniProtKB:P47985|PomBase:SPBC16H5.06|TAIR:locus:2181675|TAIR:locus:2181670 C Cytochrome b-c1 complex subunit Rieske, mitochondrial UniProtKB:P08067|PTN000015410 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- SGD S000007270 COB part_of GO:0005750 GO_REF:0000033 IBA PANTHER:PTN000444161|UniProtKB:P18946|UniProtKB:P00156|UniProtKB:P00157 C Cytochrome b UniProtKB:P00163|PTN000444200 protein taxon:559292 20240731 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000007264 AI4 part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000046096|PomBase:SPMIT.01|UniProtKB:P00395|MGI:MGI:102504 C Intron-encoded DNA endonuclease aI4 UniProtKB:P03878|PTN000046142 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000004997 COX5A part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000076140|UniProtKB:P00423|PomBase:SPCC338.10c|UniProtKB:P13073 C Cytochrome c oxidase subunit 5A, mitochondrial UniProtKB:P00424|PTN000842469 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000007260 COX1 part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000046096|PomBase:SPMIT.01|UniProtKB:P00395|MGI:MGI:102504 C Cytochrome c oxidase subunit 1 UniProtKB:P00401|PTN000046145 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000007265 AI5_ALPHA part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000046096|PomBase:SPMIT.01|UniProtKB:P00395|MGI:MGI:102504 C Intron-encoded DNA endonuclease aI5 alpha UniProtKB:Q9ZZX1|PTN000046143 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000003159 COX13 part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000161401|PomBase:SPCC1739.09c|UniProtKB:P12074 C Cytochrome c oxidase subunit 13, mitochondrial UniProtKB:P32799|PTN000161472 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000007263 AI3 part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000046096|PomBase:SPMIT.01|UniProtKB:P00395|MGI:MGI:102504 C Intron-encoded DNA endonuclease aI3 UniProtKB:P03877|PTN000046141 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000003195 MTC3 part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000076140|UniProtKB:P00423|PomBase:SPCC338.10c|UniProtKB:P13073 C Maintenance of telomere capping protein 3, mitochondrial UniProtKB:P53077|PTN000842468 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000001373 COX5B part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000076140|UniProtKB:P00423|PomBase:SPCC338.10c|UniProtKB:P13073 C Cytochrome c oxidase subunit 5B, mitochondrial UniProtKB:P00425|PTN000842470 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- SGD S000001093 COX6 part_of GO:0005751 GO_REF:0000033 IBA PANTHER:PTN000367750|PomBase:SPAC1B2.04|UniProtKB:P20674|MGI:MGI:88474 C Cytochrome c oxidase subunit 6, mitochondrial UniProtKB:P00427|PTN000367797 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005753) -- SGD S000003882 ATP2 part_of GO:0005753 GO_REF:0000033 IBA PANTHER:PTN000390017|TAIR:locus:505006590|UniProtKB:P00829|PomBase:SPAC222.12c|TAIR:locus:504956338|UniProtKB:Q57XX1|UniProtKB:P06576|RGD:621368 C ATP synthase subunit beta, mitochondrial UniProtKB:P00830|PTN000390073 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005753) -- SGD S000007268 ATP6 part_of GO:0005753 GO_REF:0000033 IBA PANTHER:PTN000151035|UniProtKB:P00846|UniProtKB:P00847 C ATP synthase subunit a UniProtKB:P00854|PTN000151067 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- SGD S000005528 ALG6 involved_in GO:0006490 GO_REF:0000033 IBA PANTHER:PTN000275691|UniProtKB:Q9BVK2|PomBase:SPBC342.01c|UniProtKB:Q9Y672|SGD:S000005528|SGD:S000005593 P Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase UniProtKB:Q12001|PTN000275794 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- SGD S000005593 ALG8 involved_in GO:0006490 GO_REF:0000033 IBA PANTHER:PTN000275691|UniProtKB:Q9BVK2|PomBase:SPBC342.01c|UniProtKB:Q9Y672|SGD:S000005528|SGD:S000005593 P Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase UniProtKB:P40351|PTN000275738 protein taxon:559292 20240730 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- SGD S000004993 ALG11 involved_in GO:0006490 GO_REF:0000033 IBA PANTHER:PTN000282963|UniProtKB:Q2TAA5|TAIR:locus:2065080|PomBase:SPCC330.08|SGD:S000004993 P GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase UniProtKB:P53954|PTN000282442 protein taxon:559292 20240801 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- SGD S000003033 ALG2 involved_in GO:0006490 GO_REF:0000033 IBA PANTHER:PTN000282458|UniProtKB:Q9H553|SGD:S000003033 P Alpha-1,3/1,6-mannosyltransferase ALG2 UniProtKB:P43636|PTN000282503 protein taxon:559292 20170228 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0008272) -- SGD S000000498 SUL1 involved_in GO:0008272 GO_REF:0000033 IBA PANTHER:PTN000212046|UniProtKB:Q86WA9|FB:FBgn0036770|UniProtKB:Q8TE54|MGI:MGI:2384791|UniProtKB:Q9BEG8|UniProtKB:Q9BXS9|RGD:620136|MGI:MGI:2159728|SGD:S000000498|MGI:MGI:2385894|MGI:MGI:892977|UniProtKB:Q96RN1|SGD:S000004082|UniProtKB:P50443|UniProtKB:Q5B9Q0|ZFIN:ZDB-GENE-030131-1566|RGD:620622 P Sulfate permease 1 UniProtKB:P38359|PTN000212418 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0008272) -- SGD S000004340 DIC1 involved_in GO:0008272 GO_REF:0000033 IBA PANTHER:PTN000756618|FB:FBgn0027610|FB:FBgn0033248|RGD:621430 P Mitochondrial dicarboxylate transporter UniProtKB:Q06143|PTN000640895 protein taxon:559292 20170228 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0008272) -- SGD S000004082 SUL2 involved_in GO:0008272 GO_REF:0000033 IBA PANTHER:PTN000212046|UniProtKB:Q86WA9|FB:FBgn0036770|UniProtKB:Q8TE54|MGI:MGI:2384791|UniProtKB:Q9BEG8|UniProtKB:Q9BXS9|RGD:620136|MGI:MGI:2159728|SGD:S000000498|MGI:MGI:2385894|MGI:MGI:892977|UniProtKB:Q96RN1|SGD:S000004082|UniProtKB:P50443|UniProtKB:Q5B9Q0|ZFIN:ZDB-GENE-030131-1566|RGD:620622 P Sulfate permease 2 UniProtKB:Q12325|PTN000212417 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000003524 MAL12 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Alpha-glucosidase MAL12 UniProtKB:P53341|PTN000040217 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000001434 IMA3 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Oligo-1,6-glucosidase IMA3 UniProtKB:P0CW40|PTN000040215 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000003519 IMA1 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Oligo-1,6-glucosidase IMA1 UniProtKB:P53051|PTN000040216 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000005517 IMA2 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Oligo-1,6-glucosidase IMA2 UniProtKB:Q08295|PTN000040220 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000000503 MAL32 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Alpha-glucosidase MAL32 UniProtKB:P38158|PTN000040221 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000003752 IMA5 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Oligo-1,6-glucosidase IMA5 UniProtKB:P40884|PTN000040218 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- SGD S000003757 IMA4 enables GO:0032450 GO_REF:0000033 IBA PANTHER:PTN000820510|CGD:CAL0000194458 F Oligo-1,6-glucosidase IMA4 UniProtKB:P0CW41|PTN001309428 protein taxon:559292 20240729 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070774) -- SGD S000006008 YDC1 enables GO:0070774 GO_REF:0000033 IBA PANTHER:PTN000310820|SGD:S000000387|MGI:MGI:1913440|UniProtKB:Q9NUN7 F Alkaline ceramidase YDC1 UniProtKB:Q02896|PTN000310914 protein taxon:559292 20200810 GO_Central
WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070774) -- SGD S000000387 YPC1 enables GO:0070774 GO_REF:0000033 IBA PANTHER:PTN000310820|SGD:S000000387|MGI:MGI:1913440|UniProtKB:Q9NUN7 F Alkaline ceramidase YPC1 UniProtKB:P38298|PTN000310913 protein taxon:559292 20200810 GO_Central

gorule-0000022

Check for, and filter, annotations made to retracted publications

total: 0

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

total: 0

gorule-0000029

IEAs should be less than one year old.

total: 0

gorule-0000030

Obsolete GO_REFs are not allowed

total: 0

gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

total: 0

gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

total: 0

gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

total: 0

gorule-0000043

Check for valid combination of evidence code and GO_REF

total: 0

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

total: 1

Messages

WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- SGD S000003863 VPS25 enables GO:0042803 GO_REF:0000033 IBA PANTHER:PTN000322234|UniProtKB:Q9BRG1 F Vacuolar protein-sorting-associated protein 25 UniProtKB:P47142|PTN000322275 protein taxon:559292 20170228 GO_Central

gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

total: 0

gorule-0000055

References should have only one ID per ID space

total: 0

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

total: 0

gorule-0000061

Allowed gene product to term relations (gp2term)

total: 45

Messages

WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000003299 YGR067C part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c C Zinc finger protein YGR067C UniProtKB:P53243|PTN005124018 protein taxon:559292 20201216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005770 ESA1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN004172926|UniProtKB:Q92993|ZFIN:ZDB-GENE-021022-3|SGD:S000000148|MGI:MGI:1915023|SGD:S000004734|MGI:MGI:1932051|FB:FBgn0039585|TAIR:locus:2144776|UniProtKB:Q9H7Z6|SGD:S000005770|PomBase:SPAC637.12c|FB:FBgn0026080|CGD:CAL0000179231|MGI:MGI:2182799|RGD:621061|UniProtKB:Q8WYB5|MGI:MGI:1919307|UniProtKB:Q92794|UniProtKB:O95251|FB:FBgn0014340|TAIR:locus:2174764|FB:FBgn0034975 C Histone acetyltransferase ESA1 UniProtKB:Q08649|PTN000065247 protein taxon:559292 20240729 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001388 STH1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001649185|SGD:S000000017|SGD:S000005816|CGD:CAL0000193582|UniProtKB:P28370|RGD:621728|MGI:MGI:99603|PomBase:SPAC1250.01|MGI:MGI:95453|UniProtKB:P51531|MGI:MGI:1935127|PomBase:SPCC1620.14c|UniProtKB:F4JY24|UniProtKB:P51532|UniProtKB:Q585S8|TAIR:locus:2173644|MGI:MGI:1935129|SGD:S000001388|WB:WBGene00002169|PomBase:SPAC25A8.01c|SGD:S000005831|MGI:MGI:88192|FB:FBgn0000212|UniProtKB:O60264|SGD:S000000449|FB:FBgn0011604|UniProtKB:Q8RWY3|CGD:CAL0000176922 C Nuclear protein STH1/NPS1 UniProtKB:P32597|PTN000084871 protein taxon:559292 20240304 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004539 FPR3 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001314507|PomBase:SPBC1347.02|SGD:S000004441|FB:FBgn0013269 C FK506-binding nuclear protein UniProtKB:P38911|PTN000054245 protein taxon:559292 20240801 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000521 DCC1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000333642|UniProtKB:Q9BVC3 C Sister chromatid cohesion protein DCC1 UniProtKB:P25559|PTN000333691 protein taxon:559292 20170228 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000003704 SET2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN002739645|WB:WBGene00003222|FB:FBgn0039559|TAIR:locus:2126714 C Histone-lysine N-methyltransferase, H3 lysine-36 specific UniProtKB:P46995|PTN002556494 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005558 HMS1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008716070|PomBase:SPBC354.05c|PomBase:SPBC19C2.09|SGD:S000005871 C Probable transcription factor HMS1 UniProtKB:Q12398|PTN000179767 protein taxon:559292 20230720 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000017 FUN30 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001649185|SGD:S000000017|SGD:S000005816|CGD:CAL0000193582|UniProtKB:P28370|RGD:621728|MGI:MGI:99603|PomBase:SPAC1250.01|MGI:MGI:95453|UniProtKB:P51531|MGI:MGI:1935127|PomBase:SPCC1620.14c|UniProtKB:F4JY24|UniProtKB:P51532|UniProtKB:Q585S8|TAIR:locus:2173644|MGI:MGI:1935129|SGD:S000001388|WB:WBGene00002169|PomBase:SPAC25A8.01c|SGD:S000005831|MGI:MGI:88192|FB:FBgn0000212|UniProtKB:O60264|SGD:S000000449|FB:FBgn0011604|UniProtKB:Q8RWY3|CGD:CAL0000176922 C ATP-dependent helicase FUN30 UniProtKB:P31380|PTN000084307 protein taxon:559292 20240304 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000002450 NRG1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000360827|MGI:MGI:99150|TAIR:locus:1005716361|FB:FBgn0002521|UniProtKB:P25490 C Transcriptional regulator NRG1 UniProtKB:Q03125|PTN000149122 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000002624 ADR1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c C Regulatory protein ADR1 UniProtKB:P07248|PTN002812233 protein taxon:559292 20201216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001923 ECO1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000118027|UniProtKB:Q5FWF5|MGI:MGI:1919238|UniProtKB:Q56NI9 C N-acetyltransferase ECO1 UniProtKB:P43605|PTN000118098 protein taxon:559292 20220417 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000971 RPH1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000075014|PomBase:SPAC343.11c|FB:FBgn0033233|FB:FBgn0036004|MGI:MGI:2446210|UniProtKB:Q336N8|UniProtKB:Q9H3R0|MGI:MGI:2442355|MGI:MGI:1924054|MGI:MGI:3606484|FB:FBgn0031759|RGD:1307528|PomBase:SPBP19A11.06 C DNA damage-responsive transcriptional repressor RPH1 UniProtKB:P39956|PTN000075323 protein taxon:559292 20230510 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004681 PDS5 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000292173|PomBase:SPAC110.02|UniProtKB:Q29RF7|UniProtKB:Q9NTI5 C Sister chromatid cohesion protein PDS5 UniProtKB:Q04264|PTN000292247 protein taxon:559292 20211216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000002228 BDF2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000524852|PomBase:SPCC1450.02|SGD:S000004391|MGI:MGI:1888520|PomBase:SPAC631.02 C Bromodomain-containing factor 2 UniProtKB:Q07442|PTN000524786 protein taxon:559292 20210812 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001934 IRC5 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001649185|SGD:S000000017|SGD:S000005816|CGD:CAL0000193582|UniProtKB:P28370|RGD:621728|MGI:MGI:99603|PomBase:SPAC1250.01|MGI:MGI:95453|UniProtKB:P51531|MGI:MGI:1935127|PomBase:SPCC1620.14c|UniProtKB:F4JY24|UniProtKB:P51532|UniProtKB:Q585S8|TAIR:locus:2173644|MGI:MGI:1935129|SGD:S000001388|WB:WBGene00002169|PomBase:SPAC25A8.01c|SGD:S000005831|MGI:MGI:88192|FB:FBgn0000212|UniProtKB:O60264|SGD:S000000449|FB:FBgn0011604|UniProtKB:Q8RWY3|CGD:CAL0000176922 C Uncharacterized ATP-dependent helicase IRC5 UniProtKB:P43610|PTN000085489 protein taxon:559292 20240304 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000104 HIR1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000352669|MGI:MGI:99430|UniProtKB:Q9LXN4|UniProtKB:P54198 C Protein HIR1 UniProtKB:P32479|PTN000352717 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000006226 YPR022C part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c C Zinc finger protein YPR022C UniProtKB:Q12139|PTN005124056 protein taxon:559292 20201216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004788 ECM5 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000075014|PomBase:SPAC343.11c|FB:FBgn0033233|FB:FBgn0036004|MGI:MGI:2446210|UniProtKB:Q336N8|UniProtKB:Q9H3R0|MGI:MGI:2442355|MGI:MGI:1924054|MGI:MGI:3606484|FB:FBgn0031759|RGD:1307528|PomBase:SPBP19A11.06 C Protein ECM5 UniProtKB:Q03214|PTN000075159 protein taxon:559292 20230510 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004734 SAS2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN004172926|UniProtKB:Q92993|ZFIN:ZDB-GENE-021022-3|SGD:S000000148|MGI:MGI:1915023|SGD:S000004734|MGI:MGI:1932051|FB:FBgn0039585|TAIR:locus:2144776|UniProtKB:Q9H7Z6|SGD:S000005770|PomBase:SPAC637.12c|FB:FBgn0026080|CGD:CAL0000179231|MGI:MGI:2182799|RGD:621061|UniProtKB:Q8WYB5|MGI:MGI:1919307|UniProtKB:Q92794|UniProtKB:O95251|FB:FBgn0014340|TAIR:locus:2174764|FB:FBgn0034975 C Histone acetyltransferase SAS2 UniProtKB:P40963|PTN000065242 protein taxon:559292 20240729 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005682 NFI1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000081660|SGD:S000005682|FB:FBgn0026160|WB:WBGene00001574|SGD:S000002817 C E3 SUMO-protein ligase SIZ2 UniProtKB:Q12216|PTN000081841 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004546 TDA9 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c C Probable transcription factor TDA9 UniProtKB:Q04545|PTN002868493 protein taxon:559292 20201216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001288 IRR1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000127652|UniProtKB:Q8WVM7|WB:WBGene00004738|PomBase:SPAC17H9.20|MGI:MGI:1098658|UniProtKB:Q8N3U4|MGI:MGI:1098583|FB:FBgn0020616|PomBase:SPCC4E9.01c C Cohesin subunit SCC3 UniProtKB:P40541|PTN000127764 protein taxon:559292 20240729 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004674 MOT3 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c C Transcriptional activator/repressor MOT3 UniProtKB:P54785|PTN008674436 protein taxon:559292 20201216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000449 ISW1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001649185|SGD:S000000017|SGD:S000005816|CGD:CAL0000193582|UniProtKB:P28370|RGD:621728|MGI:MGI:99603|PomBase:SPAC1250.01|MGI:MGI:95453|UniProtKB:P51531|MGI:MGI:1935127|PomBase:SPCC1620.14c|UniProtKB:F4JY24|UniProtKB:P51532|UniProtKB:Q585S8|TAIR:locus:2173644|MGI:MGI:1935129|SGD:S000001388|WB:WBGene00002169|PomBase:SPAC25A8.01c|SGD:S000005831|MGI:MGI:88192|FB:FBgn0000212|UniProtKB:O60264|SGD:S000000449|FB:FBgn0011604|UniProtKB:Q8RWY3|CGD:CAL0000176922 C ISWI chromatin-remodeling complex ATPase ISW1 UniProtKB:P38144|PTN002246362 protein taxon:559292 20240304 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000002599 HST4 part_of GO:0031934 GO_REF:0000033 IBA PANTHER:PTN000872167|PomBase:SPAC1783.04c C NAD-dependent histone deacetylase HST4 UniProtKB:P53688|PTN000119288 protein taxon:559292 20180419 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000003880 JHD2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000075014|PomBase:SPAC343.11c|FB:FBgn0033233|FB:FBgn0036004|MGI:MGI:2446210|UniProtKB:Q336N8|UniProtKB:Q9H3R0|MGI:MGI:2442355|MGI:MGI:1924054|MGI:MGI:3606484|FB:FBgn0031759|RGD:1307528|PomBase:SPBP19A11.06 C Histone demethylase JHD2 UniProtKB:P47156|PTN000075162 protein taxon:559292 20230510 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001431 CSS1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN005310620|RGD:620079|MGI:MGI:1289273 C Secreted protein CSS1 UniProtKB:P40442|PTN004626591 protein taxon:559292 20220330 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001927 SMC2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000434684|PomBase:SPBP4H10.06c|WB:WBGene00003367|FB:FBgn0027783 C Structural maintenance of chromosomes protein 2 UniProtKB:P38989|PTN000434737 protein taxon:559292 20220416 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005816 SNF2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001649185|SGD:S000000017|SGD:S000005816|CGD:CAL0000193582|UniProtKB:P28370|RGD:621728|MGI:MGI:99603|PomBase:SPAC1250.01|MGI:MGI:95453|UniProtKB:P51531|MGI:MGI:1935127|PomBase:SPCC1620.14c|UniProtKB:F4JY24|UniProtKB:P51532|UniProtKB:Q585S8|TAIR:locus:2173644|MGI:MGI:1935129|SGD:S000001388|WB:WBGene00002169|PomBase:SPAC25A8.01c|SGD:S000005831|MGI:MGI:88192|FB:FBgn0000212|UniProtKB:O60264|SGD:S000000449|FB:FBgn0011604|UniProtKB:Q8RWY3|CGD:CAL0000176922 C Transcription regulatory protein SNF2 UniProtKB:P22082|PTN000084874 protein taxon:559292 20240304 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000001756 NAP1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000221934|SGD:S000005190|PomBase:SPBC36B7.08c|UniProtKB:Q8I2W3 C Nucleosome assembly protein UniProtKB:P25293|PTN000222077 protein taxon:559292 20231108 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004391 BDF1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000524852|PomBase:SPCC1450.02|SGD:S000004391|MGI:MGI:1888520|PomBase:SPAC631.02 C Bromodomain-containing factor 1 UniProtKB:P35817|PTN000524787 protein taxon:559292 20210812 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000629 SNT1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN004449530|RGD:1310293|UniProtKB:O75376|SGD:S000000629|UniProtKB:Q9Y618 C Probable DNA-binding protein SNT1 UniProtKB:P25357|PTN000513695 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000004441 FPR4 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001314507|PomBase:SPBC1347.02|SGD:S000004441|FB:FBgn0013269 C FK506-binding protein 4 UniProtKB:Q06205|PTN000054244 protein taxon:559292 20240801 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005871 TYE7 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008716070|PomBase:SPBC354.05c|PomBase:SPBC19C2.09|SGD:S000005871 C Serine-rich protein TYE7 UniProtKB:P33122|PTN005341349 protein taxon:559292 20230720 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000002503 GIS1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000075014|PomBase:SPAC343.11c|FB:FBgn0033233|FB:FBgn0036004|MGI:MGI:2446210|UniProtKB:Q336N8|UniProtKB:Q9H3R0|MGI:MGI:2442355|MGI:MGI:1924054|MGI:MGI:3606484|FB:FBgn0031759|RGD:1307528|PomBase:SPBP19A11.06 C Transcriptional activator/repressor GIS1 UniProtKB:Q03833|PTN002242406 protein taxon:559292 20230510 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000003651 ASF1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000247832|MGI:MGI:1914179|UniProtKB:Q9NVP2|TAIR:locus:2033359|UniProtKB:Q9Y294 C Histone chaperone ASF1 UniProtKB:P32447|PTN000247904 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000003888 RSF2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c C Respiration factor 2 UniProtKB:P46974|PTN002868491 protein taxon:559292 20201216 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000002817 SIZ1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000081660|SGD:S000005682|FB:FBgn0026160|WB:WBGene00001574|SGD:S000002817 C E3 SUMO-protein ligase SIZ1 UniProtKB:Q04195|PTN000081842 protein taxon:559292 20240205 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005564 HIR2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000352669|MGI:MGI:99430|UniProtKB:Q9LXN4|UniProtKB:P54198 C Protein HIR2 UniProtKB:P32480|PTN000352714 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000966 CHD1 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN002473914|FB:FBgn0262519|MGI:MGI:1344395|RGD:1582725|UniProtKB:Q14839|UniProtKB:Q12873|SGD:S000000966|MGI:MGI:1344380|FB:FBgn0023395|PomBase:SPAC1783.05|PomBase:SPBP35G2.10|MGI:MGI:3036258 C Chromo domain-containing protein 1 UniProtKB:P32657|PTN000084654 protein taxon:559292 20240801 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005190 VPS75 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000221934|SGD:S000005190|PomBase:SPBC36B7.08c|UniProtKB:Q8I2W3 C Vacuolar protein sorting-associated protein 75 UniProtKB:P53853|PTN000222298 protein taxon:559292 20231108 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000148 SAS3 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN004172926|UniProtKB:Q92993|ZFIN:ZDB-GENE-021022-3|SGD:S000000148|MGI:MGI:1915023|SGD:S000004734|MGI:MGI:1932051|FB:FBgn0039585|TAIR:locus:2144776|UniProtKB:Q9H7Z6|SGD:S000005770|PomBase:SPAC637.12c|FB:FBgn0026080|CGD:CAL0000179231|MGI:MGI:2182799|RGD:621061|UniProtKB:Q8WYB5|MGI:MGI:1919307|UniProtKB:Q92794|UniProtKB:O95251|FB:FBgn0014340|TAIR:locus:2174764|FB:FBgn0034975 C Histone acetyltransferase SAS3 UniProtKB:P34218|PTN000065246 protein taxon:559292 20240729 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000000270 NRG2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000360827|MGI:MGI:99150|TAIR:locus:1005716361|FB:FBgn0002521|UniProtKB:P25490 C Probable transcriptional regulator NRG2 UniProtKB:P38082|PTN000360882 protein taxon:559292 20240206 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005831 ISW2 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN001649185|SGD:S000000017|SGD:S000005816|CGD:CAL0000193582|UniProtKB:P28370|RGD:621728|MGI:MGI:99603|PomBase:SPAC1250.01|MGI:MGI:95453|UniProtKB:P51531|MGI:MGI:1935127|PomBase:SPCC1620.14c|UniProtKB:F4JY24|UniProtKB:P51532|UniProtKB:Q585S8|TAIR:locus:2173644|MGI:MGI:1935129|SGD:S000001388|WB:WBGene00002169|PomBase:SPAC25A8.01c|SGD:S000005831|MGI:MGI:88192|FB:FBgn0000212|UniProtKB:O60264|SGD:S000000449|FB:FBgn0011604|UniProtKB:Q8RWY3|CGD:CAL0000176922 C ISWI chromatin-remodeling complex ATPase ISW2 UniProtKB:Q08773|PTN002246355 protein taxon:559292 20240304 GO_Central
WARNING - Violates GO Rule: GORULE:0000061: Found violation of: Only certain gene product to term relations are allowed for a given GO term but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002432, RO:0002325. Repaired to RO:0001025 -- SGD S000005364 SIN3 part_of GO:0000785 GO_REF:0000033 IBA PANTHER:PTN000269659|UniProtKB:Q9XIK6|TAIR:locus:2100277|PomBase:SPAC23C11.15|SGD:S000005364|UniProtKB:Q9XIE1|PomBase:SPBC1734.16c|FB:FBgn0022764|TAIR:locus:2032382|PomBase:SPBC12C2.10c|RGD:1311598|TAIR:locus:2147845|UniProtKB:Q96ST3 C Transcriptional regulatory protein SIN3 UniProtKB:P22579|PTN000269730 protein taxon:559292 20240730 GO_Central

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

total: 0

gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

total: 0

other

total: 0

GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:1902358 sulfate transmembrane transport AnnotationPropagation P GO:0015116 sulfate transmembrane transporter activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0017108 5'-flap endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium channel activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006390 mitochondrial transcription AnnotationPropagation P GO:0034246 mitochondrial transcription factor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0022841 potassium ion leak channel activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0008379 thioredoxin peroxidase activity IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium channel activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008821 crossover junction DNA endonuclease activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006269 DNA replication, synthesis of primer AnnotationPropagation P GO:0003896 DNA primase activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0032931 histone H3K56 acetyltransferase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005634 nucleus AnnotationPropagation C GO:0071037 nuclear polyadenylation-dependent snRNA catabolic process IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0008559 ABC-type xenobiotic transporter activity IBA
GO:0042908 xenobiotic transport AnnotationPropagation P GO:0008559 ABC-type xenobiotic transporter activity IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0008650 rRNA (uridine-2'-O-)-methyltransferase activity IBA
GO:0035434 copper ion transmembrane transport AnnotationPropagation P GO:0005375 copper ion transmembrane transporter activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1901800 positive regulation of proteasomal protein catabolic process AnnotationPropagation P GO:0036402 proteasome-activating activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070150 mitochondrial glycyl-tRNA aminoacylation IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004407 histone deacetylase activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0034204 lipid translocation AnnotationPropagation P GO:0140326 ATPase-coupled intramembrane lipid transporter activity IBA
GO:0015887 pantothenate transmembrane transport AnnotationPropagation P GO:0015233 pantothenate transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0046710 GDP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046037 GMP metabolic process AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004385 guanylate kinase activity IBA
GO:0035349 coenzyme A transmembrane transport AnnotationPropagation P GO:0015228 coenzyme A transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042776 proton motive force-driven mitochondrial ATP synthesis IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0030970 retrograde protein transport, ER to cytosol IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004932 mating-type factor pheromone receptor activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005388 P-type calcium transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0007007 inner mitochondrial membrane organization IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0016433 rRNA (adenine) methyltransferase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070125 mitochondrial translational elongation IBA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:0071421 manganese ion transmembrane transport AnnotationPropagation P GO:0005384 manganese ion transmembrane transporter activity IBA
GO:0006744 ubiquinone biosynthetic process AnnotationPropagation P GO:0010420 3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0042407 cristae formation IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0015746 citrate transport AnnotationPropagation P GO:0071913 citrate secondary active transmembrane transporter activity IBA
GO:0035674 tricarboxylic acid transmembrane transport AnnotationPropagation P GO:0071913 citrate secondary active transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0002196 Ser-tRNA(Ala) hydrolase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0003873 6-phosphofructo-2-kinase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004791 thioredoxin-disulfide reductase (NADPH) activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:1903710 spermine transmembrane transport AnnotationPropagation P GO:0000297 spermine transmembrane transporter activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0004402 histone acetyltransferase activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0000316 sulfite transport AnnotationPropagation P GO:0000319 sulfite transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0000319 sulfite transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0008324 monoatomic cation transmembrane transporter activity IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:0008526 phosphatidylinositol transfer activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:1903790 guanine nucleotide transmembrane transport AnnotationPropagation P GO:0001409 guanine nucleotide transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0031167 rRNA methylation AnnotationPropagation P GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0046970 NAD-dependent histone H4K16 deacetylase activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004520 DNA endonuclease activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004335 galactokinase activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005262 calcium channel activity IBA
GO:0046940 nucleoside monophosphate phosphorylation AnnotationPropagation P GO:0004017 adenylate kinase activity IBA
GO:0071934 thiamine transmembrane transport AnnotationPropagation P GO:0015234 thiamine transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006096 glycolytic process AnnotationPropagation P GO:0004743 pyruvate kinase activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0006412 translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006415 translational termination AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0016150 translation release factor activity, codon nonspecific IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0140658 ATP-dependent chromatin remodeler activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004707 MAP kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:1990180 mitochondrial tRNA 3'-end processing IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0098655 monoatomic cation transmembrane transport AnnotationPropagation P GO:0005227 calcium-activated cation channel activity IBA
GO:0098656 monoatomic anion transmembrane transport AnnotationPropagation P GO:0008308 voltage-gated monoatomic anion channel activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0043139 5'-3' DNA helicase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0089722 phosphoenolpyruvate transmembrane transport AnnotationPropagation P GO:0089721 phosphoenolpyruvate transmembrane transporter activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:0000781 chromosome, telomeric region AnnotationPropagation C GO:0031509 subtelomeric heterochromatin formation IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0017136 NAD-dependent histone deacetylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity AnnotationPropagation P GO:0051500 D-tyrosyl-tRNA(Tyr) deacylase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0035433 acetate transmembrane transport AnnotationPropagation P GO:0015123 acetate transmembrane transporter activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0019344 cysteine biosynthetic process AnnotationPropagation P GO:0004124 cysteine synthase activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0035312 5'-3' DNA exonuclease activity IBA
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006412 translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006413 translational initiation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003743 translation initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005634 nucleus AnnotationPropagation C GO:0033260 nuclear DNA replication IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015297 antiporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0097250 mitochondrial respirasome assembly IBA
GO:0006457 protein folding AnnotationPropagation P GO:0044183 protein folding chaperone IBA
GO:1903830 magnesium ion transmembrane transport AnnotationPropagation P GO:0015095 magnesium ion transmembrane transporter activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0004601 peroxidase activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0035672 oligopeptide transmembrane transport AnnotationPropagation P GO:0015421 ABC-type oligopeptide transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0001216 DNA-binding transcription activator activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0071897 DNA biosynthetic process AnnotationPropagation P GO:0003887 DNA-directed DNA polymerase activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034551 mitochondrial respiratory chain complex III assembly IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0046961 proton-transporting ATPase activity, rotational mechanism IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032543 mitochondrial translation IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0008556 P-type potassium transmembrane transporter activity IBA
GO:0015746 citrate transport AnnotationPropagation P GO:0071913 citrate secondary active transmembrane transporter activity IBA
GO:0035674 tricarboxylic acid transmembrane transport AnnotationPropagation P GO:0071913 citrate secondary active transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0006366 transcription by RNA polymerase II AnnotationPropagation P GO:0016251 RNA polymerase II general transcription initiation factor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0070124 mitochondrial translational initiation IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045040 protein insertion into mitochondrial outer membrane IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0042823 pyridoxal phosphate biosynthetic process AnnotationPropagation P GO:0004733 pyridoxamine phosphate oxidase activity IBA
GO:0001676 long-chain fatty acid metabolic process AnnotationPropagation P GO:0004467 long-chain fatty acid-CoA ligase activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0015790 UDP-xylose transmembrane transport AnnotationPropagation P GO:0005464 UDP-xylose transmembrane transporter activity IBA
GO:0006750 glutathione biosynthetic process AnnotationPropagation P GO:0004363 glutathione synthase activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0010485 histone H4 acetyltransferase activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006412 translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006414 translational elongation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0006417 regulation of translation AnnotationPropagation P GO:0003746 translation elongation factor activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0034258 nicotinamide riboside transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:1901642 nucleoside transmembrane transport AnnotationPropagation P GO:0034257 nicotinamide riboside transmembrane transporter activity IBA
GO:0035350 FAD transmembrane transport AnnotationPropagation P GO:0015230 FAD transmembrane transporter activity IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:0051864 histone H3K36 demethylase activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004856 D-xylulokinase activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006264 mitochondrial DNA replication IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006338 chromatin remodeling AnnotationPropagation P GO:1990259 histone H2AQ104 methyltransferase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0016567 protein ubiquitination AnnotationPropagation P GO:0004839 ubiquitin activating enzyme activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0008865 fructokinase activity IBA
GO:0098869 cellular oxidant detoxification AnnotationPropagation P GO:0032542 sulfiredoxin activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0099116 tRNA 5'-end processing AnnotationPropagation P GO:0008193 tRNA guanylyltransferase activity IBA
GO:0045944 positive regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0005315 phosphate transmembrane transporter activity IBA
GO:0006833 water transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015250 water channel activity IBA
GO:0015718 monocarboxylic acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0015812 gamma-aminobutyric acid transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:1905039 carboxylic acid transmembrane transport AnnotationPropagation P GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0000160 phosphorelay signal transduction system AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0018106 peptidyl-histidine phosphorylation AnnotationPropagation P GO:0000155 phosphorelay sensor kinase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0034219 carbohydrate transmembrane transport AnnotationPropagation P GO:0005351 carbohydrate:proton symporter activity IBA
GO:0035269 protein O-linked mannosylation AnnotationPropagation P GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity IBA
GO:0006913 nucleocytoplasmic transport AnnotationPropagation P GO:0017056 structural constituent of nuclear pore IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0032979 protein insertion into mitochondrial inner membrane from matrix IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0072670 mitochondrial tRNA threonylcarbamoyladenosine modification IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0007010 cytoskeleton organization AnnotationPropagation P GO:0005200 structural constituent of cytoskeleton IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0008296 3'-5'-DNA exonuclease activity IBA
GO:0089709 L-histidine transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:1990822 basic amino acid transmembrane transport AnnotationPropagation P GO:0005290 L-histidine transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0015813 L-glutamate transmembrane transport AnnotationPropagation P GO:0005313 L-glutamate transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0042626 ATPase-coupled transmembrane transporter activity IBA
GO:0061727 methylglyoxal catabolic process to lactate AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0019249 lactate biosynthetic process AnnotationPropagation P GO:0019172 glyoxalase III activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005829 cytosol AnnotationPropagation C GO:0042147 retrograde transport, endosome to Golgi IBA
GO:0006355 regulation of DNA-templated transcription AnnotationPropagation P GO:0003700 DNA-binding transcription factor activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0015914 phospholipid transport AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0120009 intermembrane lipid transfer AnnotationPropagation P GO:1990050 phosphatidic acid transfer activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0033617 mitochondrial cytochrome c oxidase assembly IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0002943 tRNA dihydrouridine synthesis AnnotationPropagation P GO:0017150 tRNA dihydrouridine synthase activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0015079 potassium ion transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0045039 protein insertion into mitochondrial inner membrane IBA
GO:0015828 tyrosine transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0005302 L-tyrosine transmembrane transporter activity IBA
GO:0035445 borate transmembrane transport AnnotationPropagation P GO:0080139 borate efflux transmembrane transporter activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0007039 protein catabolic process in the vacuole IBA
GO:0072488 ammonium transmembrane transport AnnotationPropagation P GO:0008519 ammonium channel activity IBA
GO:0015700 arsenite transport AnnotationPropagation P GO:0015105 arsenite transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015105 arsenite transmembrane transporter activity IBA
GO:0015698 inorganic anion transport AnnotationPropagation P GO:0015105 arsenite transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0071577 zinc ion transmembrane transport AnnotationPropagation P GO:0005385 zinc ion transmembrane transporter activity IBA
GO:0003333 amino acid transmembrane transport AnnotationPropagation P GO:0015171 amino acid transmembrane transporter activity IBA
GO:0016192 vesicle-mediated transport AnnotationPropagation P GO:0035615 clathrin adaptor activity IBA
GO:0005829 cytosol AnnotationPropagation C GO:0006895 Golgi to endosome transport IBA
GO:0071806 protein transmembrane transport AnnotationPropagation P GO:0008320 protein transmembrane transporter activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0015851 nucleobase transport AnnotationPropagation P GO:0015205 nucleobase transmembrane transporter activity IBA
GO:0032508 DNA duplex unwinding AnnotationPropagation P GO:0036121 double-stranded DNA helicase activity IBA
GO:0005773 vacuole AnnotationPropagation C GO:0006624 vacuolar protein processing IBA
GO:1904668 positive regulation of ubiquitin protein ligase activity AnnotationPropagation P GO:1990757 ubiquitin ligase activator activity IBA
GO:0055085 transmembrane transport AnnotationPropagation P GO:0022857 transmembrane transporter activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0006627 protein processing involved in protein targeting to mitochondrion IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0051156 glucose 6-phosphate metabolic process AnnotationPropagation P GO:0004340 glucokinase activity IBA
GO:0045893 positive regulation of DNA-templated transcription AnnotationPropagation P GO:0003713 transcription coactivator activity IBA

Table of contents

Report

Group: paint - Dataset: paint_sgd

SUMMARY

Header From Original Association File

Contents

MESSAGES

gorule-0000002

gorule-0000005

gorule-0000006

gorule-0000007

gorule-0000008

Messages

gorule-0000011

gorule-0000013

Messages

gorule-0000015

gorule-0000016

gorule-0000017

gorule-0000018

gorule-0000020

Messages

gorule-0000022

gorule-0000028

gorule-0000029

gorule-0000030

gorule-0000037

gorule-0000039

gorule-0000042

gorule-0000043

gorule-0000046

Messages

gorule-0000050

gorule-0000055

gorule-0000058

gorule-0000061

Messages

gorule-0000063

gorule-0000064

other

Predictions

Predictions (experimental)