Table of contents

Report

Group: paint - Dataset: paint_rgd

SUMMARY

This report generated on 2024-04-19

Header From Original Association File

!gaf-version: 2.2
!Created on Tue Feb 13 09:38:43 2024.
!generated-by: PANTHER
!date-generated: 2024-02-13
!PANTHER version: v.17.0.
!GO version: 2024-01-17.

Contents

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other

MESSAGES

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No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

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IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

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IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

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No annotations should be made to uninformative high level terms

Messages

gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

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Taxon-appropriate annotation check

Messages

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Dual species taxon check

gorule-0000016

With/From: IC annotations require a With/From GO ID

gorule-0000017

IDA annotations must not have a With/From entry

gorule-0000018

IPI annotations require a With/From entry

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

Messages

gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

gorule-0000029

IEAs should be less than one year old.

gorule-0000030

Obsolete GO_REFs are not allowed

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IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

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Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

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Qualifier: IKR evidence code requires a NOT qualifier

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Check for valid combination of evidence code and GO_REF

gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

Messages

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Annotations to ISS, ISA and ISO should not be self-referential

gorule-0000055

References should have only one ID per ID space

gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

gorule-0000061

Allowed gene product to term relations (gp2term)

gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

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TreeGrafter IEAs should be filtered for GO reference species

other

Predictions

GO:0006351 DNA-templated transcription AnnotationPropagation P GO:0140223 general transcription initiation factor activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004708 MAP kinase kinase activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0005251 delayed rectifier potassium channel activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006657 CDP-choline pathway AnnotationPropagation P GO:0004105 choline-phosphate cytidylyltransferase activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034982 mitochondrial protein processing IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004531 deoxyribonuclease II activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004947 bradykinin receptor activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0046835 carbohydrate phosphorylation AnnotationPropagation P GO:0045127 N-acetylglucosamine kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:1990080 2-phenylethylamine receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0007165 signal transduction AnnotationPropagation P GO:0005125 cytokine activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0008020 G protein-coupled photoreceptor activity IBA
GO:0009584 detection of visible light AnnotationPropagation P GO:0008020 G protein-coupled photoreceptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0061025 membrane fusion AnnotationPropagation P GO:0005484 SNAP receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0051170 import into nucleus AnnotationPropagation P GO:0061608 nuclear import signal receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0071805 potassium ion transmembrane transport AnnotationPropagation P GO:0005250 A-type (transient outward) potassium channel activity IBA
GO:0045892 negative regulation of DNA-templated transcription AnnotationPropagation P GO:0003714 transcription corepressor activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0034553 mitochondrial respiratory chain complex II assembly IBA
GO:0015816 glycine transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015187 glycine transmembrane transporter activity IBA
GO:0006259 DNA metabolic process AnnotationPropagation P GO:0004536 DNA nuclease activity IBA
GO:0005739 mitochondrion AnnotationPropagation C GO:0000963 mitochondrial RNA processing IBA
GO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste AnnotationPropagation P GO:0033038 bitter taste receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0007165 signal transduction AnnotationPropagation P GO:0005125 cytokine activity IBA
GO:0015791 polyol transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:1902600 proton transmembrane transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0015798 myo-inositol transport AnnotationPropagation P GO:0005366 myo-inositol:proton symporter activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0019430 removal of superoxide radicals AnnotationPropagation P GO:0004784 superoxide dismutase activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004709 MAP kinase kinase kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0005737 cytoplasm AnnotationPropagation C GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0019221 cytokine-mediated signaling pathway AnnotationPropagation P GO:0030368 interleukin-17 receptor activity IBA
GO:0070588 calcium ion transmembrane transport AnnotationPropagation P GO:0005245 voltage-gated calcium channel activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0097211 cellular response to gonadotropin-releasing hormone AnnotationPropagation P GO:0004968 gonadotropin-releasing hormone receptor activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004968 gonadotropin-releasing hormone receptor activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0001594 trace-amine receptor activity IBA
GO:0000165 MAPK cascade AnnotationPropagation P GO:0004706 JUN kinase kinase kinase activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IBA
GO:0017148 negative regulation of translation AnnotationPropagation P GO:0030371 translation repressor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0007186 G protein-coupled receptor signaling pathway AnnotationPropagation P GO:0004930 G protein-coupled receptor activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0051726 regulation of cell cycle AnnotationPropagation P GO:0004693 cyclin-dependent protein serine/threonine kinase activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:1902475 L-alpha-amino acid transmembrane transport AnnotationPropagation P GO:0015179 L-amino acid transmembrane transporter activity IBA
GO:0050911 detection of chemical stimulus involved in sensory perception of smell AnnotationPropagation P GO:0004984 olfactory receptor activity IBA
GO:0006357 regulation of transcription by RNA polymerase II AnnotationPropagation P GO:0000981 DNA-binding transcription factor activity, RNA polymeras