Table of contents

Summary

GAF summary

Found 332040 annotations in 332078 lines.

GAF Validation Summary Errors are reported first.

For rule GO_AR:0000008 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000008) No annotations should be made to uninformative high level terms, there are 3910 violations with type Warning.

For rule GO_AR:0000013 (http://www.geneontology.org/GO.annotation_qc.shtml#GO_AR:0000013) Taxon-appropriate annotation check, there are 18891 violations with type Warning.

GAF Prediction Summary

Found 833 predictions, see prediction file for details.

Used Ontology Summary

go/extensions/go-gaf    go/releases/2019-06-28/extensions/go-gaf.owl

Report

Group: cgd - Dataset: cgd

SUMMARY

This report generated on 2019-07-01

Header From Original Association File

!gaf-version: 2.0
! File name: gene_association.cgd
! Organism 1: Candida albicans SC5314, genome version: A22-s07-m01-r86, taxon: 5476
! Organism 2: Candida glabrata CBS138, genome version: s02-m07-r38, taxon: 5478
! Organism 3: Candida parapsilosis CDC317, genome version: s01-m03-r36, taxon: 5480
! Organism 4: Candida dubliniensis CD36, genome version: s01-m02-r20, taxon: 42374
! Organism 5: Candida orthopsilosis Co 90-125, taxon: 1136231
! Organism 6: Candida albicans WO-1, taxon: 294748
! Organism 7: Debaryomyces hansenii CBS767, taxon: 284592
! Organism 8: Lodderomyces elongisporus NRLL YB-4239, taxon: 379508
! Organism 9: Candida tropicalis MYA-3404, taxon: 294747
! Organism 10: Candida lusitaniae CBS6936, taxon: 36911
! Organism 11: Candida lusitaniae ATCC 42720, taxon: 306902
! Organism 12: Candida guilliermondii ATCC 6260, taxon: 294746
! Date created: Mon Jul 1 01:21:13 2019
! Created by: The Candida Genome Database (http://www.candidagenome.org/)
! Contact Email: candida-curator AT lists DOT stanford DOT edu
! Funding: NIDCR at US NIH, grant number 1-R01-DE015873-01
!

Contents

gorule-0000008

gorule-0000020

gorule-0000029

gorule-0000033

other

MESSAGES

gorule-0000008

No annotations should be made to uninformative high level terms

Messages