GORULE violations assigned by sgd


Contents

gorule-0000008 GORULE:0000008: No annotations should be made to uninformatively high level terms

gorule-0000013 GORULE:0000013: Taxon-appropriate annotation check

gorule-0000017 GORULE:0000017: IDA annotations must not have a With/From entry

gorule-0000018 GORULE:0000018: IPI annotations require a With/From entry

gorule-0000020 Violates GORULE:0000020

gorule-0000046 GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms

gorule-0000061 GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432



MESSAGES

gorule-0000008

GORULE:0000008: No annotations should be made to uninformatively high level terms

messages

gorule-0000013

GORULE:0000013: Taxon-appropriate annotation check

messages

gorule-0000017

GORULE:0000017: IDA annotations must not have a With/From entry

messages

gorule-0000018

GORULE:0000018: IPI annotations require a With/From entry

messages

gorule-0000020

Violates GORULE:0000020

messages

gorule-0000046

GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms

messages

gorule-0000061

GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432

messages