GORULE violations assigned by PINC

Contents

gorule-0000008 GORULE:0000008: No annotations should be made to uninformatively high level terms

gorule-0000020 Violates GORULE:0000020

gorule-0000061 GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050

MESSAGES

gorule-0000008

GORULE:0000008: No annotations should be made to uninformatively high level terms

• total: 2

messages

• UniProtKB P48357 LEPR involved_in GO:0007275 PMID:9537324 TAS P Leptin receptor LEPR|DB|OBR protein taxon:9606 20030904 PINC
• UniProtKB Q8N0V5 GCNT2 involved_in GO:0007275 PMID:9134435 TAS P N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase GCNT2|GCNT5|II|NACGT1 protein taxon:9606 20030904 PINC

gorule-0000020

Violates GORULE:0000020

• total: 5

messages

• UniProtKB Q12996 CSTF3 involved_in GO:0006379 PMID:7984242 TAS P Cleavage stimulation factor subunit 3 CSTF3 protein taxon:9606 20030904 PINC
• UniProtKB Q86W33 TPRA1 involved_in GO:0007568 PMID:10342878 TAS P Transmembrane protein adipocyte-associated 1 TPRA1|GPR175|TMEM227|PP6566 protein taxon:9606 20061106 PINC
• UniProtKB Q9UKF6 CPSF3 involved_in GO:0006379 PMID:8929409 TAS P Cleavage and polyadenylation specificity factor subunit 3 CPSF3|CPSF73 protein taxon:9606 20050308 PINC
• UniProtKB Q9UNP4 ST3GAL5 enables GO:0004513 PMID:9822625 TAS F Lactosylceramide alpha-2,3-sialyltransferase ST3GAL5|SIAT9|UNQ2510/PRO5998 protein taxon:9606 20050308 PINC
• UniProtKB Q9Y4K0 LOXL2 involved_in GO:0007568 PMID:9079631 TAS P Lysyl oxidase homolog 2 LOXL2 protein taxon:9606 20030904 PINC

gorule-0000061

GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050

• total: 4

messages

• UniProtKB P33993 MCM7 located_in GO:0000785 PMID:8798650 TAS C DNA replication licensing factor MCM7 MCM7|CDC47|MCM2 protein taxon:9606 20031119 PINC
• UniProtKB P45973 CBX5 located_in GO:0000792 PMID:8663349 TAS C Chromobox protein homolog 5 CBX5|HP1A protein taxon:9606 20030904 PINC
• UniProtKB P46100 ATRX located_in GO:0000792 PMID:10570185 TAS C Transcriptional regulator ATRX ATRX|RAD54L|XH2 protein taxon:9606 20030904 PINC
• UniProtKB P83916 CBX1 located_in GO:0000792 PMID:9169582 TAS C Chromobox protein homolog 1 CBX1|CBX protein taxon:9606 20040510 PINC