GORULE violations assigned by GOC


Contents

gorule-0000006 GORULE:0000006: IEP and HEP usage is restricted to terms from the Biological Process ontology

gorule-0000008 GORULE:0000008: No annotations should be made to uninformatively high level terms

gorule-0000018 GORULE:0000018: IPI annotations require a With/From entry

gorule-0000020 Violates GORULE:0000020, but was repaired

gorule-0000026 GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources

gorule-0000029 GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed

gorule-0000059 GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1

gorule-0000061 GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432



MESSAGES

gorule-0000006

GORULE:0000006: IEP and HEP usage is restricted to terms from the Biological Process ontology

messages

gorule-0000008

GORULE:0000008: No annotations should be made to uninformatively high level terms

messages

gorule-0000018

GORULE:0000018: IPI annotations require a With/From entry

messages

gorule-0000020

Violates GORULE:0000020, but was repaired

messages

gorule-0000026

GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources

messages