GORULE violations assigned by GOC-OWL
Contents
gorule-0000027
Each identifier in GAF is valid
MESSAGES
gorule-0000027
Each identifier in GAF is valid
messages
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2574 irf2bp2b enables GO:0001227 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0000978 F interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL part_of(GO:0001227)|has_input(ZFIN:ZDB-GENE-980526-164)|part_of(GO:0045650)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090909-1 tdp1 acts_upstream_of_or_within GO:0008344 PMID:33514542|ZFIN:ZDB-PUB-210131-4 IC GO:0090580 P tyrosyl-DNA phosphodiesterase 1 protein_coding_gene taxon:7955 20220909 GOC-OWL part_of(GO:0008344)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-080107-7 il6r acts_upstream_of_or_within GO:0042060 PMID:33196024|ZFIN:ZDB-PUB-201120-141 IC GO:0090023 P interleukin 6 receptor protein_coding_gene taxon:7955 20220803 GOC-OWL part_of(GO:0042060)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-000607-70 hey1 acts_upstream_of_or_within GO:0021984 PMID:27027936|ZFIN:ZDB-PUB-160401-16 IC GO:0001708 P hes-related family bHLH transcription factor with YRPW motif 1 Herp1|id:ibd1292|zgc:110572 protein_coding_gene taxon:7955 20210113 GOC-OWL results_in_specification_of(ZFA:0009155)|part_of(GO:0021984)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-2603 cul1a acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1a wu:fc13a10|zgc:77500 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2114 gmfb acts_upstream_of_or_within GO:0009611 PMID:29655639|ZFIN:ZDB-PUB-180418-43 IC GO:0150103 P glia maturation factor, beta fc25b01|wu:fa97c03|wu:fc25b01|zgc:56451|zgc:86831 protein_coding_gene taxon:7955 20200127 GOC-OWL occurs_in(ZFA:0000079)|part_of(GO:0009611)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2887 cul1b acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1b cul1|wu:fi43h07|wu:fj43a08|zgc:111899|zgc:55483 protein_coding_gene taxon:7955 20181205 GOC-OWL part_of(GO:0030593)|occurs_in(ZFA:0001180)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060526-275 alkbh4 acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P alkB homolog 4, lysine demthylase si:dkey-261j4.10 protein_coding_gene taxon:7955 20190605 GOC-OWL part_of(GO:1904086)|occurs_in(ZFA:0000309)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060628-1 tab1 acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P TGF-beta activated kinase 1/MAP3K7 binding protein 1 map3k7ip1|Tab1 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090312-21 atrn acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P attractin si:dkey-259n11.1 protein_coding_gene taxon:7955 20190605 GOC-OWL occurs_in(ZFA:0000309)|part_of(GO:1904086)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2455 rbm14b acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14b zgc:85696 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050522-496 rbm14a acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14a im:7053198|wu:fc08a04|zgc:110682 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070117-2518 nebel acts_upstream_of_or_within GO:2000197 PMID:29632136|ZFIN:ZDB-PUB-180418-2 IC GO:0051209 P nebel neb protein_coding_gene taxon:7955 20190502 GOC-OWL part_of(GO:2000197)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-778 pola2 acts_upstream_of_or_within GO:0031101 PMID:31786062|ZFIN:ZDB-PUB-191202-1 IC GO:0008283 P polymerase (DNA directed), alpha 2 wu:fb48f05|zgc:77841 protein_coding_gene taxon:7955 20210114 GOC-OWL part_of(GO:0031101)|occurs_in(ZFA:0001270)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-9814 rspo3 acts_upstream_of_or_within GO:0009950 PMID:24918770|ZFIN:ZDB-PUB-140612-1 IC GO:0030178 P R-spondin 3 cb387|sb:cb387|wu:fa13e08|zgc:162040 protein_coding_gene taxon:7955 20140930 GOC-OWL part_of(GO:0009950)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-1808 tmem88a acts_upstream_of_or_within GO:0060923 PMID:23903195|ZFIN:ZDB-PUB-130816-37 IC GO:0090090 P transmembrane protein 88 a zgc:77242 protein_coding_gene taxon:7955 20140228 GOC-OWL part_of(GO:0060923)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2902 ddx39ab acts_upstream_of_or_within GO:0042692 PMID:29636379|ZFIN:ZDB-PUB-180418-14 IC GO:0040029 P DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab ddx39|ddx39b|fc16a02|wu:fc16a02|zgc:55433|zgc:85646 protein_coding_gene taxon:7955 20190806 GOC-OWL part_of(GO:0042692)|has_input(ZFIN:ZDB-GENE-980526-561)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-051202-2 grin1b acts_upstream_of_or_within GO:0070588 PMID:32245827|ZFIN:ZDB-PUB-200422-22 IC GO:0022834 P glutamate receptor, ionotropic, N-methyl D-aspartate 1b NMDAR1.2|si:rp71-1o1.1 protein_coding_gene taxon:7955 20210720 GOC-OWL part_of(GO:0070588)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060503-592 neu1 acts_upstream_of_or_within GO:0048742 PMID:32686823|ZFIN:ZDB-PUB-200721-3 IC GO:0016997 P neuraminidase 1 si:ch211-222e23.1 protein_coding_gene taxon:7955 20220624 GOC-OWL part_of(GO:0048742)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-091204-94 hwa acts_upstream_of_or_within GO:0009798 PMID:30467143|ZFIN:ZDB-PUB-181127-52 IC GO:0060828 P huluwa si:dkey-121h17.7 protein_coding_gene taxon:7955 20190829 GOC-OWL part_of(GO:0009798)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-111020-11 vash1 acts_upstream_of_or_within GO:0001945 PMID:33547133|ZFIN:ZDB-PUB-210207-16 IC GO:0106423 P vasohibin 1 protein_coding_gene taxon:7955 20220826 GOC-OWL part_of(GO:0001945)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-980526-389 gdf3 acts_upstream_of_or_within GO:0007368 PMID:23791819|ZFIN:ZDB-PUB-130710-51 IC GO:1900107 P growth differentiation factor 3 cb556|dvr1|vg1|zDVR1|zDVR-1|zgc:103542 protein_coding_gene taxon:7955 20150316 GOC-OWL part_of(GO:0007368)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-081203-14 mir125b-1 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-1 miRNA taxon:7955 20200813 GOC-OWL has_input(ZFIN:ZDB-GENE-040912-164)|part_of(GO:0035195)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-090929-171 mir193a-1 acts_upstream_of_or_within GO:0035195 PMID:30619488|ZFIN:ZDB-PUB-190109-9 IC GO:1990825 P microRNA 193a-1 miRNA taxon:7955 20191030 GOC-OWL has_input(ZFIN:ZDB-GENE-040426-17)|part_of(GO:0035195)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-051113-208 id4 acts_upstream_of_or_within GO:0007507 PMID:26892463|ZFIN:ZDB-PUB-160220-8 IC GO:0030111 P inhibitor of DNA binding 4 cb547|fb77d04|Id4|sb:cb547|wu:fb77d04|zgc:123214 protein_coding_gene taxon:7955 20160718 GOC-OWL part_of(GO:0007507)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060602-2 pnpo acts_upstream_of_or_within GO:0006544 PMID:31759955|ZFIN:ZDB-PUB-191125-2 IC GO:0004733 P pyridoxamine 5'-phosphate oxidase im:7138360 protein_coding_gene taxon:7955 20221024 GOC-OWL part_of(GO:0006544)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-020117-2 gbx1 acts_upstream_of_or_within GO:0021999 PMID:19341460|ZFIN:ZDB-PUB-090407-14 IC GO:0060828 P gastrulation brain homeobox 1 cb619|fj77a06|wu:fj77a06 protein_coding_gene taxon:7955 20111018 GOC-OWL part_of(GO:0021999)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-1379 clcnk acts_upstream_of_or_within GO:0055064 PMID:31177533|ZFIN:ZDB-PUB-190610-4 IC GO:0015108 P chloride channel K CIC-K|clck|zgc:64141 protein_coding_gene taxon:7955 20200505 GOC-OWL part_of(GO:0055064)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2574 irf2bp2b acts_upstream_of_or_within GO:0045650 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0000978 P interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL part_of(GO:0045650)|part_of(GO:0001227)|has_input(ZFIN:ZDB-GENE-980526-164)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040724-208 tgfa acts_upstream_of_or_within GO:0045187 PMID:31763451|ZFIN:ZDB-PUB-191126-6 IC GO:0140313 P transforming growth factor, alpha si:ch211-10e8.7 protein_coding_gene taxon:7955 20220420 GOC-OWL part_of(GO:0045187)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070814-7 adamts13 acts_upstream_of_or_within GO:0006508 PMID:31753928|ZFIN:ZDB-PUB-191123-4 IC GO:0008233 P ADAM metallopeptidase with thrombospondin type 1 motif, 13 protein_coding_gene taxon:7955 20211209 GOC-OWL part_of(GO:0006508)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090821-1 lrp6 acts_upstream_of_or_within GO:0009950 PMID:23987510|ZFIN:ZDB-PUB-130905-3 IC GO:0060070 P low density lipoprotein receptor-related protein 6 protein_coding_gene taxon:7955 20201221 GOC-OWL part_of(GO:0009950)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-101209-1 tut7 acts_upstream_of_or_within GO:0071076 PMID:29625039|ZFIN:ZDB-PUB-180407-7 IC GO:0070569 P terminal uridylyl transferase 7 TUTase7|zcchc6 protein_coding_gene taxon:7955 20190131 GOC-OWL part_of(GO:0071076)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-081211-4 mir125b-2 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-2 miRNA taxon:7955 20200813 GOC-OWL has_input(ZFIN:ZDB-GENE-030131-5512)|part_of(GO:0035195)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-210225-1 hcnl1 located_in GO:0061827 PMID:32467169|ZFIN:ZDB-PUB-200530-5 IC GO:0030171 C hyperpolarization activated cyclic nucleotide-gated potassium channel-like 1 protein_coding_gene taxon:7955 20210319 GOC-OWL occurs_in(GO:0061827)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-997 ercc2 located_in GO:0005730 PMID:36065184|ZFIN:ZDB-PUB-220907-37 IC GO:0061031 C excision repair cross-complementation group 2 XPD|zgc:56365 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005730)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050522-54 banp located_in GO:0005634 PMID:35942692|ZFIN:ZDB-PUB-220810-2 IC GO:0010564 C BTG3 associated nuclear protein zgc:111954 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070702-2 wrn located_in GO:0005634 PMID:36114168|ZFIN:ZDB-PUB-220920-33 IC GO:0098868 C WRN RecQ like helicase protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090313-92 snphb located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin b si:ch211-224l10.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-081104-227 snpha located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin a si:ch211-37p17.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-041001-210 tdrd6 located_in GO:0060293 PMID:30086300|ZFIN:ZDB-PUB-180808-17 IC GO:0070925 C tudor domain containing 6 si:dkey-30j22.9|tdrd6a protein_coding_gene taxon:7955 20190606 GOC-OWL occurs_in(GO:0060293)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-081104-93 ranbp2 located_in GO:0098858 PMID:27249668|ZFIN:ZDB-PUB-160602-2 IC GO:0030031 C RAN binding protein 2 nup358|si:ch1073-55a19.2 protein_coding_gene taxon:7955 20200923 GOC-OWL occurs_in(GO:0098858)|occurs_in(ZFA:0009041)
`