GORULE violations assigned by GOC-OWL
Contents
gorule-0000027
Each identifier in GAF is valid
MESSAGES
gorule-0000027
Each identifier in GAF is valid
messages
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-1808 tmem88a acts_upstream_of_or_within GO:0060923 PMID:23903195|ZFIN:ZDB-PUB-130816-37 IC GO:0090090 P transmembrane protein 88 a zgc:77242 protein_coding_gene taxon:7955 20140228 GOC-OWL part_of(GO:0060923)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090909-1 tdp1 acts_upstream_of_or_within GO:0008344 PMID:33514542|ZFIN:ZDB-PUB-210131-4 IC GO:0090580 P tyrosyl-DNA phosphodiesterase 1 protein_coding_gene taxon:7955 20220909 GOC-OWL part_of(GO:0008344)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-080107-7 il6r acts_upstream_of_or_within GO:0042060 PMID:33196024|ZFIN:ZDB-PUB-201120-141 IC GO:0090023 P interleukin 6 receptor protein_coding_gene taxon:7955 20220803 GOC-OWL part_of(GO:0042060)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-000607-70 hey1 acts_upstream_of_or_within GO:0021984 PMID:27027936|ZFIN:ZDB-PUB-160401-16 IC GO:0001708 P hes-related family bHLH transcription factor with YRPW motif 1 Herp1|id:ibd1292|zgc:110572 protein_coding_gene taxon:7955 20210113 GOC-OWL results_in_specification_of(ZFA:0009155)|part_of(GO:0021984)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-2603 cul1a acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1a wu:fc13a10|zgc:77500 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2114 gmfb acts_upstream_of_or_within GO:0009611 PMID:29655639|ZFIN:ZDB-PUB-180418-43 IC GO:0150103 P glia maturation factor, beta fc25b01|wu:fa97c03|wu:fc25b01|zgc:56451|zgc:86831 protein_coding_gene taxon:7955 20200127 GOC-OWL occurs_in(ZFA:0000079)|part_of(GO:0009611)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2887 cul1b acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1b cul1|wu:fi43h07|wu:fj43a08|zgc:111899|zgc:55483 protein_coding_gene taxon:7955 20181205 GOC-OWL part_of(GO:0030593)|occurs_in(ZFA:0001180)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060526-275 alkbh4 acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P alkB homolog 4, lysine demthylase si:dkey-261j4.10 protein_coding_gene taxon:7955 20190605 GOC-OWL part_of(GO:1904086)|occurs_in(ZFA:0000309)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060628-1 tab1 acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P TGF-beta activated kinase 1/MAP3K7 binding protein 1 map3k7ip1|Tab1 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090312-21 atrn acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P attractin si:dkey-259n11.1 protein_coding_gene taxon:7955 20190605 GOC-OWL occurs_in(ZFA:0000309)|part_of(GO:1904086)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2455 rbm14b acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14b zgc:85696 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050522-496 rbm14a acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14a im:7053198|wu:fc08a04|zgc:110682 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070117-2518 nebel acts_upstream_of_or_within GO:2000197 PMID:29632136|ZFIN:ZDB-PUB-180418-2 IC GO:0051209 P nebel neb protein_coding_gene taxon:7955 20190502 GOC-OWL part_of(GO:2000197)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-9814 rspo3 acts_upstream_of_or_within GO:0009950 PMID:24918770|ZFIN:ZDB-PUB-140612-1 IC GO:0030178 P R-spondin 3 cb387|sb:cb387|wu:fa13e08|zgc:162040 protein_coding_gene taxon:7955 20140930 GOC-OWL part_of(GO:0009950)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2574 irf2bp2b acts_upstream_of_or_within GO:0045650 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0001227 P interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL part_of(GO:0045650)|has_input(ZFIN:ZDB-GENE-980526-164)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2902 ddx39ab acts_upstream_of_or_within GO:0055007 PMID:29636379|ZFIN:ZDB-PUB-180418-14 IC GO:0040029 P DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab ddx39|ddx39b|fc16a02|wu:fc16a02|zgc:55433|zgc:85646 protein_coding_gene taxon:7955 20190806 GOC-OWL part_of(GO:0055007)|has_input(ZFIN:ZDB-GENE-030131-95)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-041001-210 tdrd6 acts_upstream_of_or_within GO:0070925 PMID:30086300|ZFIN:ZDB-PUB-180808-17 IC GO:0005515 P tudor domain containing 6 si:dkey-30j22.9|tdrd6a protein_coding_gene taxon:7955 20190606 GOC-OWL occurs_in(ZFA:0001109)|has_input(ZFIN:ZDB-GENE-070117-694)|part_of(GO:0070925)|occurs_in(GO:0032019)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-051113-208 id4 acts_upstream_of_or_within GO:0007507 PMID:26892463|ZFIN:ZDB-PUB-160220-8 IC GO:0030111 P inhibitor of DNA binding 4 cb547|fb77d04|Id4|sb:cb547|wu:fb77d04|zgc:123214 protein_coding_gene taxon:7955 20160718 GOC-OWL part_of(GO:0007507)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-051202-2 grin1b acts_upstream_of_or_within GO:0070588 PMID:32245827|ZFIN:ZDB-PUB-200422-22 IC GO:0022834 P glutamate receptor, ionotropic, N-methyl D-aspartate 1b NMDAR1.2|si:rp71-1o1.1 protein_coding_gene taxon:7955 20210720 GOC-OWL part_of(GO:0070588)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060602-2 pnpo acts_upstream_of_or_within GO:0006544 PMID:31759955|ZFIN:ZDB-PUB-191125-2 IC GO:0004733 P pyridoxamine 5'-phosphate oxidase im:7138360 protein_coding_gene taxon:7955 20221024 GOC-OWL part_of(GO:0006544)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-071001-1 ryr2a acts_upstream_of_or_within GO:0007224 PMID:29754802|ZFIN:ZDB-PUB-180515-2 IC GO:0005262 P ryanodine receptor 2a (cardiac) pc7|ryrba|zmp:0000001097 protein_coding_gene taxon:7955 20190227 GOC-OWL part_of(GO:0007224)|part_of(GO:0021532)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-071001-1 ryr2a acts_upstream_of_or_within GO:0021532 PMID:29754802|ZFIN:ZDB-PUB-180515-2 IC GO:0005262 P ryanodine receptor 2a (cardiac) pc7|ryrba|zmp:0000001097 protein_coding_gene taxon:7955 20190227 GOC-OWL part_of(GO:0007224)|part_of(GO:0021532)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-090929-125 mir125b-3 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-3 miRNA taxon:7955 20200813 GOC-OWL part_of(GO:0035195)|has_input(ZFIN:ZDB-GENE-030131-5512)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-210225-1 hcnl1 located_in GO:0061827 PMID:32467169|ZFIN:ZDB-PUB-200530-5 IC GO:0030171 C hyperpolarization activated cyclic nucleotide-gated potassium channel-like 1 protein_coding_gene taxon:7955 20210319 GOC-OWL occurs_in(GO:0061827)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-997 ercc2 located_in GO:0005730 PMID:36065184|ZFIN:ZDB-PUB-220907-37 IC GO:0061031 C excision repair cross-complementation group 2 XPD|zgc:56365 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005730)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050522-54 banp located_in GO:0005634 PMID:35942692|ZFIN:ZDB-PUB-220810-2 IC GO:0010564 C BTG3 associated nuclear protein zgc:111954 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070702-2 wrn located_in GO:0005634 PMID:36114168|ZFIN:ZDB-PUB-220920-33 IC GO:0098868 C WRN RecQ like helicase protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090313-92 snphb located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin b si:ch211-224l10.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-081104-227 snpha located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin a si:ch211-37p17.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-041001-210 tdrd6 located_in GO:0032019 PMID:30086300|ZFIN:ZDB-PUB-180808-17 IC GO:0005515 C tudor domain containing 6 si:dkey-30j22.9|tdrd6a protein_coding_gene taxon:7955 20190606 GOC-OWL part_of(GO:0070925)|occurs_in(ZFA:0001109)|has_input(ZFIN:ZDB-GENE-070117-694)|occurs_in(GO:0032019)
`