GORULE violations assigned by GOC-OWL
Contents
gorule-0000027
Each identifier in GAF is valid
MESSAGES
gorule-0000027
Each identifier in GAF is valid
messages
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-020117-2 gbx1 acts_upstream_of_or_within GO:0021999 PMID:19341460|ZFIN:ZDB-PUB-090407-14 IC GO:0060828 P gastrulation brain homeobox 1 cb619|fj77a06|wu:fj77a06 protein_coding_gene taxon:7955 20111018 GOC-OWL part_of(GO:0021999)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-4490 epas1a acts_upstream_of_or_within GO:0060218 PMID:29339404|ZFIN:ZDB-PUB-180118-12 IC GO:0007219 P endothelial PAS domain protein 1a hif-2aa|HIF2B|wu:fd10h02 protein_coding_gene taxon:7955 20190221 GOC-OWL part_of(GO:0060218)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2902 ddx39ab acts_upstream_of_or_within GO:0000398 PMID:29636379|ZFIN:ZDB-PUB-180418-14 IC GO:0003723 P DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab ddx39|ddx39b|fc16a02|wu:fc16a02|zgc:55433|zgc:85646 protein_coding_gene taxon:7955 20190806 GOC-OWL has_input(ZFIN:ZDB-GENE-080521-3)|part_of(GO:0000398)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040526-1 dzip1 acts_upstream_of_or_within GO:0003146 PMID:9334285|ZFIN:ZDB-PUB-971203-9 IC GO:0030510 P DAZ interacting zinc finger protein 1 igu|iguana|si:dz52i16.1 protein_coding_gene taxon:7955 20100420 GOC-OWL part_of(GO:0003146)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040912-117 lypd6 acts_upstream_of_or_within GO:0009950 PMID:23987510|ZFIN:ZDB-PUB-130905-3 IC GO:0030111 P LY6/PLAUR domain containing 6 zgc:101899 protein_coding_gene taxon:7955 20140217 GOC-OWL part_of(GO:0009950)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-041001-210 tdrd6 acts_upstream_of_or_within GO:0070925 PMID:30086300|ZFIN:ZDB-PUB-180808-17 IC GO:0005515 P tudor domain containing 6 si:dkey-30j22.9|tdrd6a protein_coding_gene taxon:7955 20190606 GOC-OWL part_of(GO:0070925)|has_input(ZFIN:ZDB-GENE-070117-694)|occurs_in(GO:0060293)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050809-108 pygo2 acts_upstream_of_or_within GO:0007507 PMID:30366904|ZFIN:ZDB-PUB-181028-1 IC GO:0060828 P pygopus homolog 2 (Drosophila) fc56f02|wu:fc46c10|wu:fc56f02|wu:fi37d10|wu:fj66f08|wu:fy30b05|zgc:111854 protein_coding_gene taxon:7955 20200320 GOC-OWL part_of(GO:0007507)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090909-1 tdp1 acts_upstream_of_or_within GO:0008344 PMID:33514542|ZFIN:ZDB-PUB-210131-4 IC GO:0090580 P tyrosyl-DNA phosphodiesterase 1 protein_coding_gene taxon:7955 20220909 GOC-OWL part_of(GO:0008344)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-101209-1 tut7 acts_upstream_of_or_within GO:0071076 PMID:29625039|ZFIN:ZDB-PUB-180407-7 IC GO:0070569 P terminal uridylyl transferase 7 TUTase7|zcchc6 protein_coding_gene taxon:7955 20190131 GOC-OWL part_of(GO:0071076)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-111020-11 vash1 acts_upstream_of_or_within GO:1903670 PMID:33547133|ZFIN:ZDB-PUB-210207-16 IC GO:0106423 P vasohibin 1 protein_coding_gene taxon:7955 20220826 GOC-OWL part_of(GO:1903670)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-990415-140 psmb9a acts_upstream_of_or_within GO:0014070 PMID:31900206|ZFIN:ZDB-PUB-200105-1 IC GO:0071219 P proteasome 20S subunit beta 9a beta1ia|lmp2|psmb9|wu:fa66f04|wu:fj22d05|zgc:91842 protein_coding_gene taxon:7955 20200812 GOC-OWL has_input(SO:0000252)|has_input(CHEBI:18111)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-990415-140 psmb9a acts_upstream_of_or_within GO:1901698 PMID:31900206|ZFIN:ZDB-PUB-200105-1 IC GO:0071219 P proteasome 20S subunit beta 9a beta1ia|lmp2|psmb9|wu:fa66f04|wu:fj22d05|zgc:91842 protein_coding_gene taxon:7955 20200812 GOC-OWL has_input(CHEBI:18111)|has_input(SO:0000252)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-081203-14 mir125b-1 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-1 miRNA taxon:7955 20200813 GOC-OWL part_of(GO:0035195)|has_input(ZFIN:ZDB-GENE-030131-5512)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-081211-4 mir125b-2 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-2 miRNA taxon:7955 20200813 GOC-OWL part_of(GO:0035195)|has_input(ZFIN:ZDB-GENE-030131-5512)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-MIRNAG-090929-125 mir125b-3 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-3 miRNA taxon:7955 20200813 GOC-OWL has_input(ZFIN:ZDB-GENE-081104-145)|part_of(GO:0035195)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-080107-7 il6r acts_upstream_of_or_within GO:0042060 PMID:33196024|ZFIN:ZDB-PUB-201120-141 IC GO:0090023 P interleukin 6 receptor protein_coding_gene taxon:7955 20220803 GOC-OWL part_of(GO:0042060)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-000607-70 hey1 acts_upstream_of_or_within GO:0021984 PMID:27027936|ZFIN:ZDB-PUB-160401-16 IC GO:0001708 P hes-related family bHLH transcription factor with YRPW motif 1 Herp1|id:ibd1292|zgc:110572 protein_coding_gene taxon:7955 20210113 GOC-OWL results_in_specification_of(ZFA:0009155)|part_of(GO:0021984)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-030131-2603 cul1a acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1a wu:fc13a10|zgc:77500 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2114 gmfb acts_upstream_of_or_within GO:0009611 PMID:29655639|ZFIN:ZDB-PUB-180418-43 IC GO:0150103 P glia maturation factor, beta fc25b01|wu:fa97c03|wu:fc25b01|zgc:56451|zgc:86831 protein_coding_gene taxon:7955 20200127 GOC-OWL occurs_in(ZFA:0000079)|part_of(GO:0009611)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2887 cul1b acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1b cul1|wu:fi43h07|wu:fj43a08|zgc:111899|zgc:55483 protein_coding_gene taxon:7955 20181205 GOC-OWL part_of(GO:0030593)|occurs_in(ZFA:0001180)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060526-275 alkbh4 acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P alkB homolog 4, lysine demthylase si:dkey-261j4.10 protein_coding_gene taxon:7955 20190605 GOC-OWL part_of(GO:1904086)|occurs_in(ZFA:0000309)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-060628-1 tab1 acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P TGF-beta activated kinase 1/MAP3K7 binding protein 1 map3k7ip1|Tab1 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090312-21 atrn acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P attractin si:dkey-259n11.1 protein_coding_gene taxon:7955 20190605 GOC-OWL occurs_in(ZFA:0000309)|part_of(GO:1904086)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2455 rbm14b acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14b zgc:85696 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-071001-1 ryr2a acts_upstream_of_or_within GO:0021532 PMID:29754802|ZFIN:ZDB-PUB-180515-2 IC GO:0007224 P ryanodine receptor 2a (cardiac) pc7|ryrba|zmp:0000001097 protein_coding_gene taxon:7955 20190228 GOC-OWL part_of(GO:0021532)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-2574 irf2bp2b acts_upstream_of_or_within GO:0045650 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0001227 P interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL part_of(GO:0045650)|has_input(ZFIN:ZDB-GENE-980526-164)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090821-1 lrp6 acts_upstream_of_or_within GO:0044332 PMID:23987510|ZFIN:ZDB-PUB-130905-3 IC GO:0060070 P low density lipoprotein receptor-related protein 6 protein_coding_gene taxon:7955 20201221 GOC-OWL part_of(GO:0009950)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-091204-94 hwa acts_upstream_of_or_within GO:0009798 PMID:30467143|ZFIN:ZDB-PUB-181127-52 IC GO:0060828 P huluwa si:dkey-121h17.7 protein_coding_gene taxon:7955 20190829 GOC-OWL part_of(GO:0009798)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050522-496 rbm14a acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14a im:7053198|wu:fc08a04|zgc:110682 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070117-2518 nebel acts_upstream_of_or_within GO:2000197 PMID:29632136|ZFIN:ZDB-PUB-180418-2 IC GO:0051209 P nebel neb protein_coding_gene taxon:7955 20190502 GOC-OWL part_of(GO:2000197)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-1379 clcnk acts_upstream_of_or_within GO:0055064 PMID:31177533|ZFIN:ZDB-PUB-190610-4 IC GO:0015108 P chloride channel K CIC-K|clck|zgc:64141 protein_coding_gene taxon:7955 20200505 GOC-OWL part_of(GO:0055064)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-041001-210 tdrd6 located_in GO:0060293 PMID:30086300|ZFIN:ZDB-PUB-180808-17 IC GO:0005515 C tudor domain containing 6 si:dkey-30j22.9|tdrd6a protein_coding_gene taxon:7955 20190606 GOC-OWL part_of(GO:0070925)|has_input(ZFIN:ZDB-GENE-070117-694)|occurs_in(GO:0060293)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-040426-997 ercc2 located_in GO:0005730 PMID:36065184|ZFIN:ZDB-PUB-220907-37 IC GO:0061031 C excision repair cross-complementation group 2 XPD|zgc:56365 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005730)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-050522-54 banp located_in GO:0005634 PMID:35942692|ZFIN:ZDB-PUB-220810-2 IC GO:0010564 C BTG3 associated nuclear protein zgc:111954 protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-070702-2 wrn located_in GO:0005634 PMID:36114168|ZFIN:ZDB-PUB-220920-33 IC GO:0098868 C WRN RecQ like helicase protein_coding_gene taxon:7955 20230720 GOC-OWL occurs_in(GO:0005634)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-090313-92 snphb located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin b si:ch211-224l10.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
`
- WARNING - Invalid identifier:GORULE:0000027: assigned_by is not present in groups reference--`ZFIN ZDB-GENE-081104-227 snpha located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin a si:ch211-37p17.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
`