GORULE violations assigned by GOC-OWL

Contents

gorule-0000027 GORULE:0000027: assigned_by is not present in groups reference

MESSAGES

gorule-0000027

GORULE:0000027: assigned_by is not present in groups reference

• total: 35

messages

• MGI MGI:1278319 Fpr2 involved_in GO:0045745 MGI:MGI:5905278|PMID:11316806 IC GO:1904646 P formyl peptide receptor 2 E330010I07Rik|Fpr-rs2 protein_coding_gene taxon:10090 20170609 GOC-OWL positively_regulates(GO:0007186),occurs_in(CL:0000775)|positively_regulates(GO:0007186),occurs_in(CL:0000129)
• MGI MGI:1923321 Jakmip1 involved_in GO:0021756 MGI:MGI:5708771|PMID:26627310 IC GO:2000767 P janus kinase and microtubule interacting protein 1 5830437M04Rik|C330021K24Rik|Gababrbp|Marlin-1 protein_coding_gene taxon:10090 20180412 GOC-OWL part_of(GO:0021756),causally_upstream_of(GO:0035249),positively_regulates(GO:0002181)
• MGI MGI:1289164 Ncaph2 located_in GO:0005634 MGI:MGI:5784807|PMID:25961503 IC GO:0051309 C non-SMC condensin II complex, subunit H2 0610010J20Rik|2610524G04Rik|D15Ertd785e|Kleisin beta protein_coding_gene taxon:10090 20180412 GOC-OWL
• MGI MGI:1917923 Prdm16 involved_in GO:0048468 MGI:MGI:5582980|PMID:24703692 IC GO:0090336 P PR domain containing 16 5730557K01Rik|csp1|line 27|Mel1 protein_coding_gene taxon:10090 20150120 GOC-OWL occurs_in(CL:0002570),results_in_development_of(CL:0000449),occurs_in(EMAPA:19209)
• MGI MGI:104732 Rbmy located_in GO:0001673 MGI:MGI:2683801|PMID:14611631 IC GO:0005634 C RNA binding motif protein, Y chromosome RBM|Rbm1|Rbm1-rs1|Rbmy1a1|Rbmy1a1-rs1 protein_coding_gene taxon:10090 20110531 GOC-OWL part_of(CL:0000017)|part_of(CL:0000020)
• MGI MGI:1096347 Sema3f involved_in GO:0040011 MGI:MGI:3822054|PMID:18804103 IC GO:1902287 P sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F Sema IV|Semak protein_coding_gene taxon:10090 20170823 GOC-OWL results_in_movement_of(CL:0005023)
• ZFIN ZDB-GENE-030131-2403 tut4 acts_upstream_of_or_within GO:0071076 PMID:29625039|ZFIN:ZDB-PUB-180407-7 IC GO:0070569 P terminal uridylyl transferase 4 loc795358|TUTase4|wu:fc06h08|wu:fy37g11|zcchc11 protein_coding_gene taxon:7955 20190131 GOC-OWL part_of(GO:0071076)
• ZFIN ZDB-GENE-040426-2902 ddx39ab acts_upstream_of_or_within GO:0000398 PMID:29636379|ZFIN:ZDB-PUB-180418-14 IC GO:0003723 P DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab ddx39|ddx39b|fc16a02|wu:fc16a02|zgc:55433|zgc:85646 protein_coding_gene taxon:7955 20190806 GOC-OWL part_of(GO:0000398)|has_input(ZFIN:ZDB-GENE-060503-376)
• ZFIN ZDB-GENE-051202-2 grin1b acts_upstream_of_or_within GO:0070588 PMID:32245827|ZFIN:ZDB-PUB-200422-22 IC GO:0022834 P glutamate receptor, ionotropic, N-methyl D-aspartate 1b NMDAR1.2|si:rp71-1o1.1 protein_coding_gene taxon:7955 20210720 GOC-OWL part_of(GO:0070588)
• ZFIN ZDB-GENE-060602-2 pnpo acts_upstream_of_or_within GO:0036269 PMID:31759955|ZFIN:ZDB-PUB-191125-2 IC GO:0004733 P pyridoxamine 5'-phosphate oxidase im:7138360 protein_coding_gene taxon:7955 20221024 GOC-OWL part_of(GO:0036269)
• ZFIN ZDB-GENE-071001-1 ryr2a acts_upstream_of_or_within GO:0007224 PMID:29754802|ZFIN:ZDB-PUB-180515-2 IC GO:0005262 P ryanodine receptor 2a (cardiac) pc7|ryrba|zmp:0000001097 protein_coding_gene taxon:7955 20190227 GOC-OWL part_of(GO:0021532)|part_of(GO:0007224)
• ZFIN ZDB-GENE-071001-1 ryr2a acts_upstream_of_or_within GO:0021532 PMID:29754802|ZFIN:ZDB-PUB-180515-2 IC GO:0005262 P ryanodine receptor 2a (cardiac) pc7|ryrba|zmp:0000001097 protein_coding_gene taxon:7955 20190227 GOC-OWL part_of(GO:0007224)|part_of(GO:0021532)
• ZFIN ZDB-GENE-090909-1 tdp1 acts_upstream_of_or_within GO:0008344 PMID:33514542|ZFIN:ZDB-PUB-210131-4 IC GO:0090580 P tyrosyl-DNA phosphodiesterase 1 protein_coding_gene taxon:7955 20220909 GOC-OWL part_of(GO:0008344)
• ZFIN ZDB-GENE-101209-1 tut7 acts_upstream_of_or_within GO:0071076 PMID:29625039|ZFIN:ZDB-PUB-180407-7 IC GO:0070569 P terminal uridylyl transferase 7 TUTase7|zcchc6 protein_coding_gene taxon:7955 20190425 GOC-OWL part_of(GO:0071076)
• ZFIN ZDB-GENE-141014-1 camk1b acts_upstream_of_or_within GO:0032147 PMID:31071303|ZFIN:ZDB-PUB-190510-15 IC GO:0004683 P calcium/calmodulin-dependent protein kinase Ib protein_coding_gene taxon:7955 20191205 GOC-OWL has_input(CHEBI:29108)|has_input(ZFIN:ZDB-GENE-080402-7)|part_of(GO:0032147)|has_input(PR:000004978)
• ZFIN ZDB-GENE-990415-140 psmb9a acts_upstream_of_or_within GO:1901698 PMID:31900206|ZFIN:ZDB-PUB-200105-1 IC GO:0014070 P proteasome 20S subunit beta 9a beta1ia|lmp2|psmb9|wu:fa66f04|wu:fj22d05|zgc:91842 protein_coding_gene taxon:7955 20200812 GOC-OWL has_input(SO:0000252)|has_input(CHEBI:18111)
• ZFIN ZDB-MIRNAG-081203-14 mir125b-1 acts_upstream_of_or_within GO:0035195 PMID:21935352|ZFIN:ZDB-PUB-110922-3 IC GO:1990825 P microRNA 125b-1 miRNA taxon:7955 20200813 GOC-OWL has_input(ZFIN:ZDB-GENE-030131-5512)|part_of(GO:0035195)
• ZFIN ZDB-GENE-080107-7 il6r acts_upstream_of_or_within GO:0042060 PMID:33196024|ZFIN:ZDB-PUB-201120-141 IC GO:0090023 P interleukin 6 receptor protein_coding_gene taxon:7955 20220803 GOC-OWL part_of(GO:0042060)
• ZFIN ZDB-GENE-000607-70 hey1 acts_upstream_of_or_within GO:0021984 PMID:27027936|ZFIN:ZDB-PUB-160401-16 IC GO:0001708 P hes-related family bHLH transcription factor with YRPW motif 1 Herp1|id:ibd1292|zgc:110572 protein_coding_gene taxon:7955 20210113 GOC-OWL results_in_specification_of(ZFA:0009155)|part_of(GO:0021984)
• ZFIN ZDB-GENE-030131-2603 cul1a acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1a wu:fc13a10|zgc:77500 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
• ZFIN ZDB-GENE-040426-2114 gmfb acts_upstream_of_or_within GO:0009611 PMID:29655639|ZFIN:ZDB-PUB-180418-43 IC GO:0150103 P glia maturation factor, beta fc25b01|wu:fa97c03|wu:fc25b01|zgc:56451|zgc:86831 protein_coding_gene taxon:7955 20200127 GOC-OWL occurs_in(ZFA:0000079)|part_of(GO:0009611)
• ZFIN ZDB-GENE-040426-2887 cul1b acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P cullin 1b cul1|wu:fi43h07|wu:fj43a08|zgc:111899|zgc:55483 protein_coding_gene taxon:7955 20181205 GOC-OWL part_of(GO:0030593)|occurs_in(ZFA:0001180)
• ZFIN ZDB-GENE-060526-275 alkbh4 acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P alkB homolog 4, lysine demthylase si:dkey-261j4.10 protein_coding_gene taxon:7955 20190605 GOC-OWL part_of(GO:1904086)|occurs_in(ZFA:0000309)
• ZFIN ZDB-GENE-060628-1 tab1 acts_upstream_of_or_within GO:0030593 PMID:29444433|ZFIN:ZDB-PUB-180223-12 IC GO:0038061 P TGF-beta activated kinase 1/MAP3K7 binding protein 1 map3k7ip1|Tab1 protein_coding_gene taxon:7955 20181205 GOC-OWL occurs_in(ZFA:0001180)|part_of(GO:0030593)
• ZFIN ZDB-GENE-090312-21 atrn acts_upstream_of_or_within GO:1904086 PMID:28924386|ZFIN:ZDB-PUB-170920-7 IC GO:0110020 P attractin si:dkey-259n11.1 protein_coding_gene taxon:7955 20190605 GOC-OWL occurs_in(ZFA:0000309)|part_of(GO:1904086)
• ZFIN ZDB-GENE-040426-2455 rbm14b acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14b zgc:85696 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
• ZFIN ZDB-GENE-030131-4490 epas1a acts_upstream_of_or_within GO:0060218 PMID:29339404|ZFIN:ZDB-PUB-180118-12 IC GO:0007219 P endothelial PAS domain protein 1a hif-2aa|HIF2B|wu:fd10h02 protein_coding_gene taxon:7955 20190221 GOC-OWL part_of(GO:0060218)
• ZFIN ZDB-GENE-030131-778 pola2 acts_upstream_of_or_within GO:0031101 PMID:31786062|ZFIN:ZDB-PUB-191202-1 IC GO:0008283 P polymerase (DNA directed), alpha 2 wu:fb48f05|zgc:77841 protein_coding_gene taxon:7955 20210114 GOC-OWL part_of(GO:0031101)|occurs_in(ZFA:0001270)
• ZFIN ZDB-GENE-050522-496 rbm14a acts_upstream_of_or_within GO:0009953 PMID:31636951|ZFIN:ZDB-PUB-191023-9 IC GO:0030509 P RNA binding motif protein 14a im:7053198|wu:fc08a04|zgc:110682 protein_coding_gene taxon:7955 20201001 GOC-OWL part_of(GO:0009953)
• ZFIN ZDB-GENE-070117-2518 nebel acts_upstream_of_or_within GO:2000197 PMID:29632136|ZFIN:ZDB-PUB-180418-2 IC GO:0051209 P nebel neb protein_coding_gene taxon:7955 20190502 GOC-OWL part_of(GO:2000197)
• ZFIN ZDB-GENE-040426-2574 irf2bp2b acts_upstream_of_or_within GO:0045650 PMID:31123027|ZFIN:ZDB-PUB-190528-1 IC GO:0001227 P interferon regulatory factor 2 binding protein 2b irf2bp2|wu:fa12b04|wu:fb73g01|zgc:63864 protein_coding_gene taxon:7955 20201203 GOC-OWL has_input(ZFIN:ZDB-GENE-980526-164)|part_of(GO:0045650)|negatively_regulates(GO:0003674)
• ZFIN ZDB-GENE-040426-1379 clcnk acts_upstream_of_or_within GO:0055064 PMID:31177533|ZFIN:ZDB-PUB-190610-4 IC GO:0015108 P chloride channel K CIC-K|clck|zgc:64141 protein_coding_gene taxon:7955 20200505 GOC-OWL part_of(GO:0055064)
• ZFIN ZDB-GENE-081104-93 ranbp2 located_in GO:0005642 PMID:31164446|ZFIN:ZDB-PUB-190606-3 IC GO:0061665 C RAN binding protein 2 nup358|si:ch1073-55a19.2 protein_coding_gene taxon:7955 20200923 GOC-OWL occurs_in(ZFA:0009041)|has_input(ZFIN:ZDB-GENE-011105-1)|occurs_in(GO:0005642)|directly_positively_regulates(GO:0003674)
• ZFIN ZDB-GENE-081104-227 snpha located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin a si:ch211-37p17.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)
• ZFIN ZDB-GENE-090313-92 snphb located_in GO:0044295 PMID:31481398|ZFIN:ZDB-PUB-190905-4 IC GO:0051659 C syntaphilin b si:ch211-224l10.3 protein_coding_gene taxon:7955 20200723 GOC-OWL occurs_in(GO:0044295)