GORULE violations assigned by ComplexPortal


Contents

gorule-0000001 Expecting a known ECO GAF code, e.g ISS

gorule-0000007 GORULE:0000007: IPI should not be used with catalytic activity molecular function terms

gorule-0000008 GORULE:0000008: No annotations should be made to uninformatively high level terms

gorule-0000013 GORULE:0000013: Taxon-appropriate annotation check

gorule-0000016 GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column

gorule-0000018 GORULE:0000018: IPI annotations require a With/From entry

gorule-0000020 Violates GORULE:0000020

gorule-0000061 GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050



MESSAGES

gorule-0000001

Expecting a known ECO GAF code, e.g ISS

messages

gorule-0000007

GORULE:0000007: IPI should not be used with catalytic activity molecular function terms

messages

gorule-0000008

GORULE:0000008: No annotations should be made to uninformatively high level terms

messages

gorule-0000013

GORULE:0000013: Taxon-appropriate annotation check

messages

gorule-0000016

GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column

messages

gorule-0000018

GORULE:0000018: IPI annotations require a With/From entry

messages

gorule-0000020

Violates GORULE:0000020

messages

gorule-0000061

GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050

messages